Methanosarcina mazei C16: MSMAC_0866
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Entry
MSMAC_0866 CDS
T04626
Name
(GenBank) RNase L inhibitor
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
mmac
Methanosarcina mazei C16
Brite
KEGG Orthology (KO) [BR:
mmac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mmac03009
]
MSMAC_0866
Ribosome biogenesis [BR:
mmac03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
MSMAC_0866
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
Fer4_RLI
AAA_21
Fer4
Fer4_6
Rad17
AAA_23
Fer4_21
AAA_16
AAA_22
AAA_29
Fer4_2
RNA_helicase
Fer4_9
Fer4_7
Fer4_10
AAA
NACHT
RsgA_GTPase
Fer4_4
VapE-like_dom
KAP_NTPase
Fer4_8
Motif
Other DBs
NCBI-ProteinID:
AKB70756
UniProt:
A0A0E3RUB2
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Position
1042026..1043792
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AA seq
588 aa
AA seq
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MRIAILNKDRCQPRRCSKECEKYCPRVRTGDETIVFEADGKPVISEELCVGCGICVNKCP
FEAIMIIGLPEALQEPTHRYGPNGFALFGLPVPRTGKVTGILGPNGIGKSTSVQILSGAL
VPNFGKGKGDWDTVLEHYAGTALHDYFKDVVDGRVKVSQKPQYVDLIPRAFKGKTSELLE
KTDERGVLDELIDHLGLRSVIGRNITELSGGELQRVAIAACAARDAQFYFFDEISPYLDI
YQRINAARLIQEISKDRAVLVVEHDLALLDMLTDVIHIAYGEPAGFGVVTLPKSVRVGIN
QYLKGYLPEENIRIRPESIKFEIHPPREDAQFRSMISFNGFSKKFGDGFSLKATGGNLRE
GEVLGIVGPNGIGKSTFVKVLAGEIKPDEGDPGIEVKISYKPQYIKADIPLSVQDFLRGI
SKQFGSSYYEVEISNPLQLEKIYDSLLTDLSGGELQRVAVAACLSQEADLYILDEPSAHL
DVEQRSMVTKVINRFAENNQKTALVVDHDIYMIDMLSQRLLVFEGEPSVYGEAHGPFSME
GGMNRFLKNLGITFRRDEETRRPRVNNLGSRLDREQKESGNYYYSAKE
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgagaatagctatacttaacaaagacaggtgccagcccagaaggtgcagcaaggagtgc
gaaaagtactgtcccagagtcaggacaggagatgagaccattgtttttgaggcagacgga
aagccggtcatctccgaggaactctgtgtgggctgcggaatatgcgtcaacaaatgtcct
ttcgaagccattatgatcatagggctccctgaagccctgcaggaaccaactcacaggtac
ggaccaaacggttttgcccttttcgggcttccggtacccaggacaggaaaagtaaccggt
attctgggacctaacggtataggaaaaagtacttcggtccagatcctctcaggagccctg
gttcccaatttcgggaagggaaaaggagactgggacactgtactcgagcattatgccgga
actgcgcttcacgactatttcaaggacgttgtggacgggagggtaaaggtttcccagaag
ccccagtatgttgacctcattcccagagccttcaaaggaaaaacctctgagctgcttgag
aaaaccgatgaaagaggcgttctggatgagcttatcgaccatcttggcctgagaagtgtt
ataggaagaaatattaccgaattgagcggtggagaactgcagagggttgctattgctgcc
tgtgcggcaagggatgctcagttctatttctttgacgaaataagcccttatcttgatatt
taccagaggatcaacgcagcccgccttatccaggaaatttcaaaggacagggcagtactt
gtggtcgagcacgaccttgcacttcttgatatgcttacagatgtaattcacatagcttac
ggtgaacccgcaggctttggtgtggttactcttccgaaaagtgtgcgtgtggggattaac
cagtaccttaaaggctacctccctgaagaaaacataaggattcgccctgaatccatcaag
tttgagatccaccctccaagggaagatgcccagttcaggtccatgatttcctttaacggt
ttctcaaagaagtttggggacggattctccctcaaagccacaggaggaaacctgcgtgaa
ggcgaggtgctcgggatagttggtcctaatgggatagggaaatcaactttcgtaaaagtt
ctggcaggagaaataaagcccgacgaaggagacccgggaatcgaggtaaaaatctcctac
aagccccagtacatcaaagccgatattcctttgagtgtccaggacttcttaaggggcatt
tcaaagcagttcggaagcagttattatgaggttgagatctcaaaccctctccagcttgag
aaaatttacgacagcctgcttacagacctcagtggtggggaacttcagagggtagcagtt
gctgcctgtctttcccaggaagcagacctctatattcttgacgagccgagcgcccacctt
gatgttgagcagcgttccatggtcaccaaagtcatcaaccgttttgccgaaaacaaccag
aaaaccgccctggtggttgatcacgatatttacatgatagatatgctcagccagcgtctc
cttgtttttgaaggagaaccctcagtttacggtgaagcccacggtcctttcagcatggaa
ggcggcatgaacaggttcctgaaaaacctcggcataaccttccgcagggatgaagaaaca
aggcgtccccgtgtaaacaaccttggctcaaggcttgaccgggagcagaaagaaagcgga
aactattattattctgctaaggagtga
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