Methanosarcina mazei C16: MSMAC_1547
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Entry
MSMAC_1547 CDS
T04626
Name
(GenBank) Heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mmac
Methanosarcina mazei C16
Pathway
mmac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSMAC_1547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmac03019
]
MSMAC_1547
03110 Chaperones and folding catalysts [BR:
mmac03110
]
MSMAC_1547
03029 Mitochondrial biogenesis [BR:
mmac03029
]
MSMAC_1547
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmac04147
]
MSMAC_1547
Enzymes [BR:
mmac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
MSMAC_1547
Messenger RNA biogenesis [BR:
mmac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
MSMAC_1547
Chaperones and folding catalysts [BR:
mmac03110
]
Heat shock proteins
HSP60 / Chaperonin
MSMAC_1547
Mitochondrial biogenesis [BR:
mmac03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
MSMAC_1547
Exosome [BR:
mmac04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSMAC_1547
Exosomal proteins of other body fluids (saliva and urine)
MSMAC_1547
Exosomal proteins of breast cancer cells
MSMAC_1547
Exosomal proteins of colorectal cancer cells
MSMAC_1547
Exosomal proteins of bladder cancer cells
MSMAC_1547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF7178
GTP-bdg_M
Motif
Other DBs
NCBI-ProteinID:
AKB71437
UniProt:
A0A0E3RYA6
LinkDB
All DBs
Position
1894484..1896094
Genome browser
AA seq
536 aa
AA seq
DB search
MASKQIMFDESARKALLSGVDKVANTVKITLGPKGRYVVLDKSTKPVVTNDGVTIAKEIE
LHDKFENMGAKLVKEVASKTQDNTGDGTTTATLLAQSMIREGLKNISAGANPIEVKKGIE
IATEKVVGYLKGKSVEVKGKDKIIQVATISANNDEEIGNLIADAMERVGYNGVITVEDSK
TMETSLDVVEGMQFDRGFVSPYMALDTEKMVCEFEDPYILITDKKINSMKQIVPVLEKVA
SEGRSLLIIAEDVDGDAQAALILNIIRGALRVCAVKAPGFGNERKEMLEDIAVLTGGQVI
SEEKGMKLEEFSDYMLGNARKVTVDNHKTIIVEGRGDKADIDERVRIIEAQINIAEADYR
KTELKKRMAKLGGGVAVIKVGAATETELKEKKMRIDDALNATKAAVEEGVVTGGGISLFR
AAATLDSLDLDGDRQIGVKIVQRAIEDPVRQIAANAGREGAEVVAAIKAESSEHFGYNAK
TDVFEDLFEAGVIDPTKVVRSGLQNAASIAGMVLTTEALVTDFDEEKDERTAAIII
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaagcagataatgtttgatgaaagtgcaagaaaagcactcttaagcggtgtg
gataaggtcgcaaataccgtcaagatcaccctggggcccaaagggcgttatgtcgttctg
gataaaagcacaaaacccgtggtcacaaatgacggtgtcaccattgcaaaagaaatagag
ctccatgataagttcgaaaacatgggagccaaacttgttaaggaagtagcctccaaaacc
caggacaacaccggggacgggacaacgacagcaacccttcttgcccagagcatgatccgg
gaaggcctgaagaacatcagtgccggggcaaacccaattgaagtcaagaaagggattgag
attgccacggaaaaggttgtgggatacctcaaaggcaagagtgttgaggtaaaaggaaag
gataaaatcatacaggtagccactatttccgcaaacaacgatgaagaaataggcaacctg
attgccgacgctatggaaagggtcggctacaacggggtaatcactgttgaagactcaaag
accatggagactagccttgatgtggtcgaaggtatgcagttcgaccgcgggtttgtttcc
ccgtacatggctcttgacaccgaaaagatggtctgcgagtttgaagacccatatatcctg
attacggacaaaaaaatcaacagcatgaagcagatcgtgcctgtgcttgagaaagttgct
tctgaagggagatctctcctgattattgctgaagatgtcgacggagacgcccaggctgct
ttgattcttaacatcatccgcggagccctcagagtttgcgctgtaaaagctccggggttc
ggaaacgagagaaaagagatgcttgaggacattgctgtccttaccggtgggcaggtaata
agcgaagaaaagggcatgaagcttgaagaattcagcgattacatgcttggaaatgccagg
aaagtcacggttgacaaccacaaaaccattatcgttgaaggcaggggcgataaggcagac
atcgatgaaagagtcaggattatcgaagcccagatcaatattgctgaagctgattacaga
aagaccgagcttaaaaagcgcatggcaaaactgggcggcggcgttgcagtaattaaagtt
ggagccgcaaccgaaaccgaactcaaggaaaagaagatgagaatcgatgacgccctgaat
gcaacgaaagcagcagtagaggaaggtgtggtcacaggaggaggaataagtctcttccgt
gcggcggcgacccttgattcccttgaccttgacggcgacaggcagattggagtaaaaatt
gtccagagagctatagaagaccctgtacgccagatcgctgcaaatgcaggaagagaaggc
gctgaagtggtagcagccataaaagctgaatccagtgagcatttcgggtacaacgcaaaa
acggatgtttttgaagacctcttcgaagcaggagtaatcgacccgacaaaagtcgtaaga
agcgggctccagaacgctgcctcaatcgcaggcatggtgcttacaacagaagctcttgta
acagacttcgatgaagaaaaggatgaaaggacagcggcaatcattatctga
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