Methanosarcina mazei C16: MSMAC_1919
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Entry
MSMAC_1919 CDS
T04626
Name
(GenBank) DNA-directed RNA polymerase subunit D
KO
K03047
DNA-directed RNA polymerase subunit D [EC:
2.7.7.6
]
Organism
mmac
Methanosarcina mazei C16
Pathway
mmac03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mmac00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSMAC_1919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmac03021
]
MSMAC_1919
Enzymes [BR:
mmac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSMAC_1919
Transcription machinery [BR:
mmac03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MSMAC_1919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Fer4_7
Fer4_9
Fer4
Fer4_6
Fer4_8
Fer4_21
Fer4_16
Fer4_10
DUF4879
Motif
Other DBs
NCBI-ProteinID:
AKB71809
UniProt:
A0A0E3RV83
LinkDB
All DBs
Position
2346818..2347618
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AA seq
266 aa
AA seq
DB search
MTMEVDILELSDRSAKFVLSRVSMAFANGVRRAMIADVPTLAIEYVNLYDNTSVLYDEQL
ALRLSLIPLVTDIETYMPQAECEVCGGEGCPACEVSLTLSAEGPGTVYSRDLISSDPKIQ
PADPNIPIVELKKGQKLVLEAIAHMGYGRDSVKWQAGVACGYKNVPVITIENCDACGHCA
AECPKGIIRVEEAGARIAEDDLIKCSLCRLCEQVCDINAIKVDFYENAFVFTMESDGSYT
AKDLTINAANVIKGKAEELLAILDQL
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgacgatggaagtagacattctggagttatcggacagatctgcaaagtttgtgctgtcc
cgggtaagcatggcttttgctaacggcgtacggcgtgccatgatcgccgatgtacccact
cttgcaatcgagtatgtaaacctttacgacaatacctccgtgctctatgatgaacagctg
gctctccgtctctccttaatcccgcttgtaacggatatagagacgtatatgcctcaggct
gagtgtgaggtctgcggaggagaaggctgccctgcctgcgaggtctccttaaccctcagt
gcagaaggtcctggtaccgtttattcgcgtgaccttatctcttctgaccccaagatccag
ccggcagatcctaatatcccgattgttgagctgaaaaagggacagaagcttgtgctcgag
gctattgcccatatgggctacggcagagacagcgtaaaatggcaggcaggcgttgcctgt
ggctacaagaacgtacctgttataaccattgagaactgcgatgcctgcggacactgtgcg
gcagaatgccctaaaggcattatccgggttgaagaagcaggagcaaggattgctgaggac
gatcttataaaatgttccctctgcaggctctgtgagcaggtatgtgatattaacgctata
aaagtggatttctacgaaaacgcttttgttttcaccatggagtccgatggttcatatacg
gctaaagaccttaccattaatgctgcaaacgtcattaaaggtaaagccgaggaacttctg
gcaattctggaccagctctga
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