Methanosarcina mazei C16: MSMAC_1948
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Entry
MSMAC_1948 CDS
T04626
Name
(GenBank) DNA double-strand break repair Rad50 ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mmac
Methanosarcina mazei C16
Brite
KEGG Orthology (KO) [BR:
mmac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmac03400
]
MSMAC_1948
DNA repair and recombination proteins [BR:
mmac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MSMAC_1948
Archaeal homologous recombinant proteins
MSMAC_1948
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
AAA_21
AAA_29
SbcC_Walker_B
ABC_tran
AAA_16
DUF2937
Motif
Other DBs
NCBI-ProteinID:
AKB71838
UniProt:
A0A0E3S0A1
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All DBs
Position
2389270..2392482
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AA seq
1070 aa
AA seq
DB search
MKLKNLYIENIRSYKKLDFTFEDGVTVISGVNGSGKSSLLEACFMGLFGSKILSKDFVLA
DMIFKGAESAKIHLGFEHLGREYLIEQAFRYSLKSENASNSRCVLFADGENIVDQATRTY
EEVCALLNMDEEAYRNCAYIRQGEIDVLINAKPRDRQRMIDDLLQLGKLEEYRERAGYAK
TAVRRLERDAKNSFLGVKAEIEGIESTEPVAAVNRLRQKVKETDAILEELNKKKEFAAAR
KGELDLRIAEYRERLQEIEVLKQAIRKSQEDKAACFKEKETFSEEVQVQRRVLLELGEEN
SGMREECGFGDLEIEALLLQQEKSESSAREKVNSGSKELALLLKEEETGVQALRELEKDK
VETERVLVECRTSIGAANKEIEGYRANIKQLEEENKRLREKAGFGAAGEIASVIKELEEK
ESLLRDRKNEVSTKLGFALKEKESGDASLRELDSEMQSCRVAVSKGKSEIEALEKEIRDN
SKAVLDFQEQKSEVFAGLKALGFTEEQLENLEDFNELLLENKNRLHGKEKELEVTLREIE
NTLRKNRELLAEGKCPTCGQELKGSGIACTAEECEEKKEKLSLELADIKLQRAELEKKLN
RLKEAKKLEKQAYDYDIEIEKLLEKAKASEKLIDTHRTRIEEDSLKLESSGKRKQELEAA
GSKLLLDIKALREQEKAAQKVHLESEKALREAKVFERKLAENASEIESLNGKIRTSLALI
ENYGQRLGELNEKLKAFAEKETQSKEKLEALELTLETARKNEEEAKKAHIESARLLGEAK
KLQANLLRMQNIKHKISEFEAGIGNLAEKIGFFDREIVERSDRIRQLEGKLEGNRLEELQ
QKLARFEEAQVNITEKIREITAEKDTLLKEIGMIENSLKRLKELKEELKALENKRLYLEA
VYNNADELENTYMRVRADMRARNIGALSILLNEMFSFMYTNNAYSHIELDPEYNLTVYRK
DGTPLEPKLLSGGERAIFNLVLRCAIYRLLALGFGGDRPDGLPPMILDEPTVFLDRGHVR
QLLKLIDMMRSIGVGQIIVVSHDESLIDSADHVFQVEKDPLTNMSSITKI
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
gtgaagctgaaaaacctgtacatagaaaatattcggagctataaaaagctggacttcacc
ttcgaagacggagtaactgtaatttccggggtaaacggaagtgggaaatcaagcctgctc
gaagcctgcttcatggggcttttcgggagcaaaatcctttcaaaagactttgtgcttgct
gatatgatcttcaaaggggcggaaagtgcaaagattcatcttggatttgaacaccttggc
agggagtacctcattgagcaggctttcaggtattctttaaaaagtgaaaatgcttcgaac
tcaagatgtgtgctgtttgctgacggagaaaatatcgttgaccaggcaacccgtacctat
gaagaagtctgtgccctcctgaacatggatgaagaggcatacaggaactgcgcatatatc
cggcagggggagattgacgtccttatcaatgcaaagccaagggacaggcagcgaatgatt
gacgacctgctgcagcttggaaaactcgaggagtaccgcgaaagggcagggtatgcaaag
actgctgtaagaaggcttgagagggatgcaaaaaacagctttctgggagtgaaagccgaa
atcgagggaatcgaaagcaccgagccggttgcagctgttaacaggctcaggcagaaagta
aaagaaactgatgctattctcgaagagcttaataaaaagaaagaatttgcagctgcacgt
aaaggagaacttgacctcaggattgccgaatacagggaacgcctgcaggaaattgaggtt
ttgaagcaggctatccgtaaatctcaggaagataaggctgcctgttttaaagaaaaagaa
actttttctgaagaagtacaggtgcaaaggcgtgttctgcttgaactcggcgaagaaaac
tctggcatgagggaagaatgtggttttggagaccttgaaattgaagccctgcttttgcag
caggaaaagtcggaatcttctgccagggaaaaagtaaattccggatcaaaagaacttgcc
ctcctcctgaaagaagaagaaacaggcgtacaggcattgcgtgagcttgaaaaagataaa
gttgagactgagcgtgttctcgttgaatgcagaaccagtatcggagctgcaaataaagaa
attgaagggtacagggcaaatataaagcagctcgaagaggaaaataagcggctgagggaa
aaagcaggttttggagctgctggtgaaattgcttcagtcataaaggaactcgaagaaaag
gaaagccttctcagagaccggaaaaatgaagtatcgacaaaacttggctttgctcttaag
gaaaaagaatccggggatgcaagccttcgtgagcttgattctgaaatgcaaagctgcagg
gttgcggtcagtaaagggaaatcggagattgaggcgcttgaaaaggaaatcagggataac
tcaaaagcagtgctggattttcaggagcagaaatctgaagtttttgcagggctgaaggct
cttggtttcacagaggagcagcttgaaaaccttgaggattttaacgagcttctgctggaa
aacaaaaaccgtcttcatggaaaagaaaaggagcttgaggttactttaagggaaattgaa
aataccctccgtaaaaaccgggaactgcttgccgaagggaagtgccctacctgcgggcag
gagttgaaagggtcaggaattgcatgcacggcagaagagtgcgaagagaaaaaagaaaag
ctttctctggaacttgctgacataaagctgcagagggctgaacttgagaaaaagctcaac
cggcttaaggaagcaaagaagctggaaaaacaggcatatgattatgatatcgagattgaa
aagctccttgaaaaggcaaaagcttcagaaaaactgatagatacccacagaacccggata
gaagaagattctttgaaactcgaaagctctggtaagcggaagcaggaacttgaagccgct
ggaagtaagctccttctggatatcaaagctttgcgggagcaggaaaaagctgctcaaaaa
gtccatcttgaaagtgaaaaagccctcagggaggcaaaagtttttgaaagaaagctggct
gaaaacgcttctgaaatcgaatccctgaacggcaaaatccgtacatctcttgcgctgata
gaaaattacgggcagaggcttggagaactaaatgaaaagttaaaggcatttgcggaaaaa
gaaactcagtcgaaagaaaaactcgaagctcttgaacttaccttggaaactgcgcgcaaa
aatgaagaagaggcaaaaaaagcccacatcgaaagtgcacggcttcttggggaggcaaaa
aaacttcaggctaacctgctccgcatgcaaaatataaagcataaaatatccgagtttgag
gctggtattgggaacctcgcagaaaagataggtttctttgaccgcgagattgtggaacgc
agtgacaggataaggcagctggaaggaaaactggaaggaaacaggcttgaagaactccag
cagaaactcgcccggtttgaagaggcgcaggtaaatattacggagaaaatccgggaaata
actgccgaaaaggatactcttctcaaagagatcggcatgatagaaaacagcttgaagcgt
ttaaaggaactcaaagaagaactgaaggctcttgaaaacaaaaggctctatcttgaagcc
gtatacaataatgctgatgagcttgaaaacacctatatgcgcgtccgggctgatatgcgg
gcaaggaacataggagccctttcaattctcctgaatgagatgttcagcttcatgtatacg
aataatgcttattcacatatcgagcttgaccccgaatacaacctgacggtttaccgaaaa
gacgggacccctcttgagcccaaacttttgagcggcggagagcgtgcaatcttcaacctt
gtcctgcgctgtgccatttacaggcttcttgctctcggttttggtggggacaggcctgac
gggcttcctccgatgatccttgacgagcccacagttttccttgaccgcgggcatgtcagg
cagcttttgaaactcatagacatgatgcgcagcatcggagtggggcagatcatagtggtt
tcccacgacgagtcccttatagattctgctgaccatgtcttccaggttgaaaaagaccct
cttaccaatatgtcatcgattacaaagatctga
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