Methanosarcina mazei C16: MSMAC_2013
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Entry
MSMAC_2013 CDS
T04626
Name
(GenBank) Translation elongation factor 1 alpha subunit
KO
K03231
elongation factor 1-alpha
Organism
mmac
Methanosarcina mazei C16
Pathway
mmac03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mmac00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MSMAC_2013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmac03019
]
MSMAC_2013
03016 Transfer RNA biogenesis [BR:
mmac03016
]
MSMAC_2013
03012 Translation factors [BR:
mmac03012
]
MSMAC_2013
04131 Membrane trafficking [BR:
mmac04131
]
MSMAC_2013
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmac04147
]
MSMAC_2013
Messenger RNA biogenesis [BR:
mmac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
MSMAC_2013
Transfer RNA biogenesis [BR:
mmac03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
MSMAC_2013
Translation factors [BR:
mmac03012
]
Eukaryotic type
Elongation factors
MSMAC_2013
Membrane trafficking [BR:
mmac04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
MSMAC_2013
Exosome [BR:
mmac04147
]
Exosomal proteins
Proteins found in most exosomes
MSMAC_2013
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Septin
Motif
Other DBs
NCBI-ProteinID:
AKB71903
LinkDB
All DBs
Position
complement(2465976..2467244)
Genome browser
AA seq
422 aa
AA seq
DB search
MAADKPHMNLAVIGHIDHGKSTFVGRLMYDAGAVPAHIIEKYKEEAKQKGKESFAFAWVM
DSLKEERERGITIDIAHKRFDTDKFYFTVVDCPGHRDFVKNMITGASQADAAVLVVAAPD
GVMAQTKEHIFLSRTLGINQLIVAINKMDAVDYSEARYKEVVEQVSGILKMIGFKPSEIP
FIPTSAFHDDNIMKLSDKTPWYKGPAIMEALNSLKEPEKPSTLPLRIPVEDAYTISGIGT
VPVGRVETGVMKKGDKVVFMPGGAGGEVKSIEMHHEEIPQATPGDNIGWNVRGIGKNDVR
RGDVCGHADNPPKVADEFVGQIVVLQHPSAITAGYTPVFHAHTSQIACQLIALNKKLDPK
TGQVKEENPTFLKAGDAAIVTIKPTKPMVIEPVKEIPQLGRFAIRDMGMTIAAGMCMSVK
QK
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagacaaaccgcacatgaatttagcagtgattggtcacattgaccacggaaag
tcaacattcgtaggacgtttaatgtatgatgcaggagctgtacctgctcacattatcgag
aagtacaaggaagaagcaaaacagaaaggtaaggaatccttcgcttttgcatgggttatg
gactctcttaaggaagagcgtgaaagaggtatcacaatcgacatcgctcacaagagattc
gacacagacaagttctactttacagtcgtggactgccctggccaccgtgacttcgttaag
aacatgattacaggcgcttcccaggctgatgcagctgttctcgttgtcgcagctcctgat
ggtgtcatggcccagaccaaggaacacatcttcctttccaggacactcggcatcaaccag
cttattgttgcaatcaacaagatggatgcagtagactacagcgaagcaaggtacaaggaa
gtcgttgagcaggtatccggtatccttaagatgatcgggttcaagccaagcgaaatcccc
ttcatcccgacctctgcattccacgatgacaacattatgaagctcagcgacaagactccc
tggtacaagggcccggcaatcatggaagccctcaacagccttaaggagcctgaaaagccg
tccactctccctctcaggatccctgtcgaagacgcatacactatctccggtatcggaact
gtgcctgtaggcagagttgaaaccggtgtaatgaagaagggtgacaaggtagtcttcatg
cccggcggagccggcggtgaagttaagtccattgaaatgcaccatgaagaaattccacag
gcaacccctggagacaacatcggctggaacgtccgtggtatcggaaagaacgacgtccgc
agaggagacgtttgtggccatgctgacaacccaccaaaggtagctgacgagtttgtcgga
cagatcgtggtccttcagcacccctcagcaatcactgcaggttacacacctgttttccac
gcccacacctcccagatcgcatgccagctgatcgctcttaacaagaagctggacccgaag
actggccaggttaaggaagaaaacccgactttccttaaggcaggagatgcagcaatcgtt
accatcaagccaacaaagccgatggtcatcgagcccgtaaaagaaattccacagctcggc
aggttcgctatccgtgatatgggtatgacaattgccgcaggcatgtgcatgagtgttaag
cagaaataa
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