KEGG   Methanosarcina mazei C16: MSMAC_2404
Entry
MSMAC_2404        CDS       T04626                                 
Name
(GenBank) Replication factor C large subunit
  KO
K04800  replication factor C large subunit
Organism
mmac  Methanosarcina mazei C16
Pathway
mmac03030  DNA replication
Brite
KEGG Orthology (KO) [BR:mmac00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MSMAC_2404
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mmac03032]
    MSMAC_2404
DNA replication proteins [BR:mmac03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     MSMAC_2404
SSDB
Motif
Pfam: AAA RCF1-5-like_lid RuvB_N Rad17 AAA_22 AAA_assoc_2 AAA_14 AAA_16 nSTAND3 IPT AAA_6 AAA_30 AAA_24 DNAX_ATPase_lid Gp44_lid DUF815 NACHT TsaE IstB_IS21 ABC_tran AAA_28 AAA_25 RNA_helicase AAA_7
Other DBs
NCBI-ProteinID: AKB72294
UniProt: A0A0E3RWC5
LinkDB
Position
2933651..2935468
AA seq 605 aa
MMSAIEWAEKYRPRTLGDVVGNRKAVQDLRKWAEEWQSGIPEKRAVILYGPAGIGKTSSA
HALAGDMEWEVIELNASDQRTAGVIEKIAGSAASMNTFFGGKRLIILDEADNLHGTADRG
GMRAISGIIKSTLQPIILIANDIYGLTPTVRNICLEIKFGSVQSRSMVPALKKVCESEGV
SCSQEAVLQIAENAGGDFRSAINDLQAAANGKKALEAEDISTAGRDVKENIFKTMQKIFK
STDCKRALESAYGLDESPEDLVHWIDENLPIQYARKDGDLEDIKTGFGYLSKADIYLGRV
KKRQNYRMWRYASMLMVCGAALSKTRPYPGFIKYQQPSLWRRLGQTRSRRDMRDNIASKI
GEHSFESMHYSRNNLLGFYSILLKDEASAVELTANLGLELEELMYLSGSAKVSKKLQKIY
DEAQNLLETKRDRTEEQEFFKAPAPAADDKQATLHCPVNIPEKEGNASAEKPESPGPQSP
ERKQKTLDLGFDTPQKLPEKKRSSEMKLPENPEPAENNLFSLSEPLPEKGPIPDFAGKKS
LPELEEEKPSLSPLKKMSPANKEASKQGVKQGASEKGSPAADTQGGMEDGSKKAEPKNQK
TLFDF
NT seq 1818 nt   +upstreamnt  +downstreamnt
atgatgtcggcaattgaatgggctgaaaaataccgaccccggacccttggagatgtcgtg
gggaacaggaaggcagtgcaggatttgagaaagtgggctgaggaatggcagtccgggatt
cctgagaaaagggcagtgattctttacgggcctgcagggatagggaagacttcaagcgct
cacgcactggcaggggatatggaatgggaggttatagagctcaatgcaagcgaccagagg
actgcaggtgttattgagaagatagccggctcagcagcgtcaatgaatactttttttggg
ggtaagcggctcattatacttgatgaagctgacaatctccacgggactgcagacaggggc
gggatgagggccatttccgggatcataaaatccacgctccagccgataatacttattgca
aatgatatttacgggttaactcccacagtccggaacatttgtctggaaattaagtttggg
tccgtgcagagccggtccatggttcccgctttgaagaaggtctgtgaatctgagggagtc
tcctgcagccaggaagctgtcctgcaaattgcagaaaatgcgggcggagacttcaggagc
gctatcaatgatcttcaggctgcagctaacgggaagaaggctctcgaagctgaagatatc
agcactgcaggcagagatgttaaagagaatatctttaagacgatgcagaagatctttaaa
agcactgactgcaaaagggctcttgaatccgcatacgggcttgatgagagtcccgaggat
cttgtgcactggatagatgagaacctgccaatccagtacgcgcggaaggatggcgacctc
gaagatataaaaacgggttttggctacctttcaaaggctgacatttatctcgggcgcgtg
aagaaacgccagaactacaggatgtggaggtatgccagcatgctcatggtctgcggggct
gccctttcaaagacaagaccgtatcccggctttattaagtaccagcagccttcactctgg
agaaggctcgggcagacccgttccaggcgtgatatgcgggataatattgcttcaaagatc
ggggagcacagctttgagtcgatgcattattccaggaacaaccttttaggtttttattca
atattgttaaaggatgaggcgtctgctgttgaacttactgcaaacctcgggcttgagctt
gaagaactgatgtacctttcaggaagcgcaaaggtcagcaaaaaacttcagaaaatttac
gatgaagcccagaaccttctggaaacgaaaagggatagaactgaagaacaggaatttttt
aaggctcctgctcctgcggcagatgataaacaggcaactctccactgtccggttaatatt
cctgaaaaagaagggaacgcttcagccgaaaaacccgaatctcccggtccccagtctccg
gaaagaaagcagaaaacccttgaccttggatttgacacacctcaaaagcttcctgagaaa
aaaaggtcttcagaaatgaaattgcctgaaaatcctgagcctgcagaaaataatctgttc
tctctttctgagcctctgcccgaaaagggtccaattcctgacttcgcagggaaaaagtcc
cttcctgaactcgaagaagagaagccgtctctttcaccgttaaaaaagatgagtccggcc
aataaagaagcttcaaaacagggagtgaaacagggagcatctgaaaaaggttcgcctgct
gcagatacgcagggaggcatggaagatggttcgaaaaaagccgaacctaaaaatcagaaa
acactttttgacttttaa

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