Methanosarcina mazei C16: MSMAC_2477
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Entry
MSMAC_2477 CDS
T04626
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mmac
Methanosarcina mazei C16
Brite
KEGG Orthology (KO) [BR:
mmac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmac03032
]
MSMAC_2477
03400 DNA repair and recombination proteins [BR:
mmac03400
]
MSMAC_2477
Enzymes [BR:
mmac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MSMAC_2477
DNA replication proteins [BR:
mmac03032
]
Prokaryotic type
DNA Topoisomerases
MSMAC_2477
DNA repair and recombination proteins [BR:
mmac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MSMAC_2477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
OEP
Toprim_2
Auto_anti-p27
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
AKB72367
UniProt:
A0A0E3S0F7
LinkDB
All DBs
Position
complement(3032065..3034563)
Genome browser
AA seq
832 aa
AA seq
DB search
MTVVAFAEKNKAAAQIASILGEGEVDKISVEGLPAYEFKWKGEEWLVMGLSGHIMNYDFP
EKYNKWSEVDPGTLLGVDPEKFVTRKEYEAAIKNLAKRADKIILACDYDREGENIGFEAK
TLAEEVTDVPVARARFSALSPKEVRKAFENPVDPDHNLAMAAEARQILDLKMGAAFTRFV
TLSVREKARTKDVLSIGPCQTPTCGFVYEREKAIRAFEAKDFWKITAVFAAKGGEFEGTH
RAGNIHDKEKAAEIFKRLKGAKEGLVVKKTVKEAKTSPPNPLNTTEFLKRASKFLGISPE
VALETAEQLYLAGFTSYPRTETNKYADDFDFKSLVFDFARQKEYKPFAESILSAPIVPKN
GEKDAHDHPPIHPIRAAARGEVSSAVNIPQAAEVYDLIARHFLANLMPAAVFEKTHLHLQ
VKEEPFDSSGTVLKDPGWLEVYPFENKKDKLLPFVEEKEKVDVKKLSNTKSKTSPPKKLT
EAELLTLMDRHGIGTKATAPTHIETNKKRGYFENKGKTISILDTGFTLMEGLSLSVPILV
RPDIRSKIEALIQEVEDGKKEFEAALADGTVLIKEMYAQLEANKKELTSNIAGTIKDEAA
LEDKKNYIGTCKACGHVLRIIQTDSGRFVGCTGYPDCRNSFSLPKTGALTVLRSKECKKE
GAAVLKVGNKYNWAVGIGPCFKCEFEKECYPPETVGPCPECDGSMFLISFKDNRFLGCTK
RCGYTHSVPKTGKLTLLDKTCETCGWKLFRLKEEVEGNESLEEDICINRRCTEGIKYWKK
VGPRSGARAQGKISADSGAELGARSTARNKERTTARRVSKTVSVADSRKDRK
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgacagttgtcgcatttgcagaaaaaaacaaagcagcagcccagatcgccagcatcctt
ggcgaaggggaagtggataaaatatcagtggaagggctgcctgcctacgagtttaaatgg
aaaggagaagagtggcttgtgatggggctttccggccacatcatgaactacgactttcca
gaaaaatataacaaatggagtgaagttgaccccgggacactgcttggagttgatccggaa
aaatttgtgaccaggaaggagtatgaagctgcaataaaaaacctggcaaaaagggcagac
aaaattatccttgcatgcgactatgacagggaaggggaaaatatagggtttgaagcaaaa
acccttgccgaagaggtcactgatgtccctgttgcaagggcacgtttttcagccctttcc
ccaaaagaagtaaggaaagcctttgaaaaccctgtagatcctgaccacaaccttgctatg
gctgccgaagccaggcagattcttgacctgaagatgggggctgcatttacacgttttgtt
acgctctcggtcagggaaaaagcaaggacaaaagacgtcctttcaatagggccctgccag
actcctacctgcgggtttgtttacgaaagggaaaaggctatccgggcttttgaggcaaag
gacttctggaagattactgcggtttttgctgcaaaaggaggggaattcgaaggcacccac
agggcaggaaacatccatgacaaagaaaaggcagctgaaatcttcaagaggctgaaaggg
gcaaaagaaggactcgttgtaaagaagaccgtaaaagaagcaaaaaccagccctccaaat
ccacttaacaccacagagttcctgaagcgggcttcaaagttcctggggatcagccccgaa
gttgcactcgaaaccgcagaacagctctaccttgcagggtttacgagctacccgaggaca
gagaccaataaatatgcagatgactttgacttcaagtccctggtctttgatttcgcaagg
cagaaagagtataagccatttgcagaatcaatcctctctgccccgatagttccaaagaat
ggagaaaaagacgcacatgaccacccacctatccacccgatcagggcggctgcaagggga
gaggtcagttctgcagtaaatataccgcaggctgctgaagtttatgaccttattgcaagg
catttcctggcaaacctcatgcctgcagcagttttcgaaaaaacccacctccacctgcag
gttaaggaagagccttttgactcctcggggaccgtgcttaaagatccgggctggcttgaa
gtttatccatttgaaaataaaaaagataagcttctcccgtttgtagaggaaaaagagaaa
gtggacgtaaaaaagctgagcaatacaaagtcaaagaccagccccccgaaaaaactgaca
gaagctgaactcctgacccttatggacaggcacgggatagggacaaaagcaacagcacct
acacatatagaaacaaacaaaaaaaggggttatttcgagaataaaggaaagacaatttca
atcctcgatacaggctttacccttatggaagggctttccctgtctgtccctatccttgtc
aggcctgatatccgctcaaagatagaagcccttatccaggaagttgaagacgggaaaaaa
gagttcgaagcggctcttgccgatggtacggtcctgattaaagagatgtatgcccagctt
gaagcaaacaaaaaagagcttacctcaaacattgcaggcacaataaaggatgaagccgcc
ctcgaagataaaaagaactatatcgggacatgtaaggcttgcgggcacgttctcagaatc
atacaaacggattccgggcgttttgtgggttgcacaggctatcctgactgcagaaactcc
ttctctctacccaagaccggagcccttaccgtgctcaggagcaaggaatgtaaaaaagaa
ggggcagccgtcctgaaggtgggaaacaaatacaactgggctgttggtattggaccctgc
tttaaatgcgagtttgaaaaggagtgctatccccctgaaaccgtgggaccctgccctgaa
tgtgacggaagcatgttcctgatatctttcaaagacaaccgcttcctgggctgtacaaag
cgttgtggatatacccattccgttcctaaaaccggaaaactgaccctcctcgacaaaacc
tgtgagacctgcggctggaagctgttcaggctgaaagaagaggtagaaggaaacgaaagc
ctggaagaagatatctgcataaaccggcgctgcactgaaggaataaagtactggaaaaaa
gtgggacccagaagtggagcaagagcacagggcaagatttctgcagactctggagcagag
ctcggggcgagaagtacggcaagaaataaggaaaggacgacggctcgcagagtttcaaaa
actgtatcagtggcagacagcaggaaagaccggaagtga
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