Methanosarcina mazei C16: MSMAC_2558
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Entry
MSMAC_2558 CDS
T04626
Name
(GenBank) tRNA pseudouridine 13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mmac
Methanosarcina mazei C16
Brite
KEGG Orthology (KO) [BR:
mmac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmac03016
]
MSMAC_2558
Enzymes [BR:
mmac01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
MSMAC_2558
Transfer RNA biogenesis [BR:
mmac03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MSMAC_2558
Prokaryotic type
MSMAC_2558
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AKB72448
UniProt:
A0A0E3S1L8
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All DBs
Position
complement(3150299..3151615)
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AA seq
438 aa
AA seq
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MEVPEIEKQIGINLYSTDTTGLGGQLRQEIEDFIVKEITNREEGEEGKYLIVELTKRDWD
THHLTRTLSRILQVSQKRISVAGTKDKRALTTQKISIFDTDASEIEKIHLKDIELKVLGR
SRKSVELGDLWGNDFRITVRNIENSPEETEALLKKTTDEILAQGGVPNFFGIQRFGSVRP
VTHLVGKAIVEGNFEKAALLYIAEPFPEEPEETKNARQFVKDTLDFKEGLKTYPLRLGHE
RAMMNHLIANPEDYSGSFRVLPQNLYRMFVHGYQSYIYNIILCRRIEAGIPLNRAVEGDI
VCFRNEVGLPDSSKTEKVTSETVNAMNRLLKLGRAFITAPLPGYNTEFASGIPGEIENGV
LKELGVSLEGFNIEKFPEMSSKGTRREVLLEVKPKFEAGEDELNPGKSKAVLEFMLPKGS
YATTVLREYMKVDPLKMS
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcccggaaattgaaaaacagataggaataaatctttattctaccgataccaca
ggtcttggagggcagctccgccaggagatagaggatttcattgtaaaagaaataacaaac
cgtgaggaaggcgaggaaggaaaatacctcattgttgaacttacaaaaagggactgggac
acgcaccacctgacccggactctctcaaggatcctgcaggtaagccagaaaagaatcagt
gttgcaggcacgaaggacaaaagagctcttaccacacagaaaatcagcatatttgatacc
gatgcatcagaaatagaaaaaattcacctgaaggacatagagctgaaagtgctcggacgc
tcccggaaatccgtagaacttggggatctgtggggaaatgatttcaggattacagtgaga
aatattgagaattccccggaagagacggaggctctgctcaaaaagacgactgatgaaatt
cttgctcagggaggtgtccccaactttttcgggattcagcgcttcggctctgttcgccct
gtaactcacctggtaggaaaagccattgttgaagggaactttgaaaaagcagccctcctc
tacattgccgaacctttcccggaagaaccagaggaaacaaaaaatgctcgccagtttgtc
aaagataccctggatttcaaagaagggctcaaaacctatcctctccgtctgggccacgaa
agggctatgatgaaccatttgatagcaaatcctgaagactattccggatctttccgcgtg
cttccgcagaacctttacaggatgttcgttcacgggtaccagtcctatatttacaatata
atcctctgccgcaggatagaagccggcataccattgaaccgggcggttgaaggggatata
gtctgtttcagaaacgaagtcgggcttccggattcctcaaagaccgaaaaagtcacttcc
gaaaccgtaaatgccatgaaccgcctgctaaagctcggcagagccttcataactgccccc
cttccgggttataatactgaatttgcatccgggattccgggagaaatagaaaacggggtt
cttaaagaacttggagtttctcttgagggctttaacatagaaaaattccctgaaatgagc
tcgaagggcaccagaagggaagttctcctggaggtaaaaccgaagtttgaggctggagaa
gatgagctgaacccaggaaaatcaaaggcagttcttgagttcatgctgccgaaggggagt
tatgctacaactgttctgcgagaatacatgaaagtagacccgttaaagatgagttaa
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