Methanosarcina mazei C16: MSMAC_2965
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Entry
MSMAC_2965 CDS
T04626
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mmac
Methanosarcina mazei C16
Brite
KEGG Orthology (KO) [BR:
mmac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmac03032
]
MSMAC_2965
03400 DNA repair and recombination proteins [BR:
mmac03400
]
MSMAC_2965
Enzymes [BR:
mmac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MSMAC_2965
DNA replication proteins [BR:
mmac03032
]
Prokaryotic type
DNA Topoisomerases
MSMAC_2965
DNA repair and recombination proteins [BR:
mmac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MSMAC_2965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HHH_5
Cdd1
DUF4332
DNA_pol_lambd_f
Cas_TM1802
IMS_HHH_1
TfoX_C
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AKB72855
UniProt:
A0A0E3WRC9
LinkDB
All DBs
Position
complement(3657904..3660162)
Genome browser
AA seq
752 aa
AA seq
DB search
MHLIVTEKNIAARRIAAILAPKSPKKERVSGVDVYRYEIGSGENKQETAVVGLSGHIVGI
DFPKEYNNWQKVDARDLIDAEITTTPINRKIVTALKSLGKEADRVTIATDYDREGELIGV
EALNIIKQVNPKIPFDRVRYSAITPKAIEAAFSNPTNVDFNLADAGHSRQVIDLVWGAAL
TRYISLAAGRLGKMFLSVGRVQSPTLSLIVDREKERNIFVPTPYWEIHVELEDAAGETFS
AQHSTRRFLDKEEASKVFRKLGKKAELKEIEKGTKTDQPPTPFNTTGFISAANSIGLSPS
NAMRIAESLYTNGYISYPRTDNTVYPDTLDLRAQIEIFKEGPFKEYANTLLEKPELVPTR
GKKETTDHPPIFPASLAKESDLKEDEWKVYELVVRRFFATFAGPSIWETMRLKLDIEGEE
FRANGARLLEPGWRWYYPYNAPEDRLLPELKEGDLLKVIKKEMLDKETQPPGRYGQGRLI
NIMEELGLGTKATRHEIISKLYSRAYIHGNPVQPTNTSFSVMDTLEKYSPTITKPDMTKL
LEENMDKIAEGKIKEEAVLEESREMLKQVFSELDKNRDNIIESLQAGLREDKIIGDCSLC
GNELMIRRSKRGSRFIGCSNYPNCTFSLPLPKSGQIIVTDKLCEAHGLHHIRIINQGKRA
WDLGCPQCNFIEWQKTQKEEQAQQPKKERPKSIKDLEGVGKATAGKLEEAGITSVEALAE
ADPVELAKTIKTSVKKIKNWQTSCNGGAVEDL
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttatcgtaacggaaaaaaatatagcggcaaggaggatagctgcgattctggct
cctaaaagtcctaaaaaggaaagagtcagcggagtggacgtataccggtacgagatcggt
tccggcgaaaacaaacaggaaactgcagttgtggggctttccggccatattgtcgggata
gacttcccgaaggagtacaacaactggcagaaggtcgatgccagagaccttatagacgcc
gagattacaacgaccccgatcaaccggaagatagtgaccgctttaaagagccttggaaaa
gaagcggacagggtcactattgcaactgactacgaccgcgaaggagaactcataggagtc
gaagctctgaatatcataaaacaggttaacccgaaaattccttttgacagggtccgttac
agtgcaataactccaaaagcaattgaagctgcattctcaaatcctacaaatgttgatttt
aacctagcagacgcaggccattccaggcaggtaattgaccttgtctggggagctgccctt
acaagatacatttcccttgcagcaggcaggctcggaaaaatgtttctttccgtgggaagg
gtccagtccccaaccctttctcttattgttgacagggagaaagagagaaatatatttgtc
ccaaccccttactgggaaatccacgtagaactcgaagacgctgcaggagagactttttca
gcccagcattctacccgccgttttctggataaagaggaagcctcaaaggtattcaggaaa
ctgggcaaaaaagcggaattaaaggaaatcgaaaagggaacaaagacagaccagcctccc
acaccttttaatactacgggctttatcagcgcggcaaactcaatagggctcagcccttca
aacgccatgcgcatagccgaatccctttataccaatggttacatttcataccccaggaca
gataacacggtttatcccgatactcttgacctgagggctcaaatagagatattcaaagaa
ggaccttttaaagaatatgcaaatacacttcttgaaaagcccgaacttgtccccacccgt
ggtaaaaaagaaactacagaccacccgcctatctttcctgcttcccttgcaaaggaatcc
gacctcaaagaagatgagtggaaagtttacgagcttgtagtcaggcgcttttttgcaacc
tttgccggaccgagcatatgggaaaccatgaggcttaaacttgatatcgaaggagaggag
ttcagggcaaacggggcaaggcttcttgaacccggatggcgctggtattatccgtacaat
gctcctgaagacaggctgctcccggaacttaaggaaggtgacttattaaaggtgataaag
aaagagatgctggataaagaaacccagcctccgggacgttacgggcagggaaggcttatc
aatataatggaagagctcgggctcgggacaaaagcaacccgccacgagattataagcaag
ctatattccagggcttatatccacggaaaccctgttcagcctactaatacctctttttcc
gtaatggacactctggagaaatattcgcctactattacaaagccggatatgacaaagctg
cttgaagaaaatatggacaaaatagcagagggtaaaatcaaagaggaagctgtccttgaa
gagtcccgcgagatgctcaagcaggtcttttctgaactcgataaaaacagggataatatc
atagaatctttacaggcaggtctccgggaagataaaatcataggcgattgctctttatgc
ggaaacgaactcatgatccgcaggtcaaaaaggggaagccgtttcataggctgcagcaat
taccctaactgtactttctccctgcccctgccgaaaagcggacagatcatagtgaccgat
aagctctgcgaagctcacggcctgcaccatatccgcataatcaaccagggaaaaagagca
tgggaccttggatgtccccagtgcaatttcatagaatggcagaagacccagaaggaagag
caggcacagcagccgaaaaaagaaaggcccaaatccattaaagacctcgaaggcgtggga
aaagccaccgcaggaaaactggaagaagccggtatcacaagtgttgaagccctggcagaa
gcagaccctgtggaacttgcaaaaaccataaagacaagtgtaaagaaaatcaaaaactgg
cagacctcatgcaatggcggcgcagttgaggatttgtaa
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