Methanosarcina mazei C16: MSMAC_3341
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Entry
MSMAC_3341 CDS
T04626
Name
(GenBank) Archaeal DNA polymerase II small subunit
KO
K02323
DNA polymerase II small subunit [EC:
2.7.7.7
]
Organism
mmac
Methanosarcina mazei C16
Pathway
mmac03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
mmac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSMAC_3341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmac03032
]
MSMAC_3341
Enzymes [BR:
mmac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSMAC_3341
DNA replication proteins [BR:
mmac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
D-family DNA polymerases
MSMAC_3341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
Metallophos
Metallophos_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AKB73231
UniProt:
A0A0E3S000
LinkDB
All DBs
Position
complement(4121368..4123326)
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AA seq
652 aa
AA seq
DB search
MNEIDIVRAVTEEGYQISPSAVELIKSSISPESLLKYVLSTIDDCIFVIESEHIDLKGFE
ASKKAFDASESPSLTLSQAQSDNMSSGNISSGNISSGNKPSDIISSPSSEPVNSGRLKNS
DKLKTPGSLSDSLEEEGSTLSVETEVVSGFDIPHNNPVTDSDISFSQEPASDIAAHGSLA
STVYPSSGGIEKQVSSFFGDTGSKSFSAFKSASRADSFFSNEGALSSSSRAEGVRHISGL
NPITVLSDITGHSTCVGEYVQFVQYFRDRYSKLSEILRGRMNARPIESLKKRSFRRGSDG
GNEELSIIGIVSDITSTNNGHKILSLEDSTGSFSVLIRNSDKELYELASRLILDEVIGVT
GSVTNDGNLMLATKILQPDVPNSIQHRTGSHGKVVLISDVHVGSSQFLEDAWLDFLDFLK
GESDSEEMREIASQVRYLVVAGDLVDGIGIYPDQEMELDILDVYEQYRKAADYFKEIPRH
IRVIISPGNHDAVRQAEPQPALPERICADFPENVTFVGNPALVDLDGIRILIYHGRSIDD
LVASVPGVSYHEPAGAVLEMLKRRHLAPTYGSRVSISPEKKDYFIIDPVPDIIHTGHVHT
LGVQRYKNVLLVNSGTWQAQTEFQKRVNLVPVPARVPVVDLADFDVKILAFD
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaattgatattgtaagggcagtaacagaagaagggtatcagataagcccttca
gcagtagagctaattaaatcaagtatttcccctgaaagccttctaaaatacgtcctttca
actattgatgactgtattttcgttattgaatctgaacatatcgatctgaaaggttttgaa
gcttcgaaaaaggcttttgacgcttctgaatctccctcgctaacactttctcaagcacag
tcagataacatgtcttcaggaaatatatcttcaggaaatatatcttcaggaaataaacct
tcagatattatttcctctccttcctcagagcccgtaaattctggaagattaaaaaattct
gataagttaaaaactcctggttctctttcagactctctcgaggaagagggatcaactttg
agtgttgaaacggaagtggtttcagggtttgatatccctcacaacaatccagtaacagat
tctgacatctctttttctcaggagcctgcttctgatattgctgcccacggttctctagcc
agtactgtttatccatcttctggcgggatagaaaaacaggtttcttcttttttcggagat
accggctctaaatcgttttctgcttttaaaagtgcttccagagctgactcctttttctca
aatgaaggagctctttcttcaagttccagagctgaaggagtcagacatatttctggcctt
aaccccattacagtgctttccgacatcaccgggcattcaacctgtgtcggagagtatgtg
cagttcgtgcaatacttcagagatagatacagcaagctctctgaaatcctcaggggcagg
atgaatgcacgccccatagaaagtttgaagaagaggagttttaggcgcggatcagacggc
ggtaatgaggagctatccattatagggattgtttcggatatcaccagcaccaataatggg
cacaaaattctttctctggaggactctacaggctctttttcagtccttatccggaacagc
gataaagaactctacgaactggcttcgcggcttattctggatgaggttatcggagtaaca
ggctcggttacaaatgacggaaaccttatgcttgctacaaagattcttcagcctgatgtc
ccgaacagtatacagcacaggacaggaagccacggaaaagttgtgcttatttcggatgta
catgtgggaagttcccagtttcttgaagacgcctggctggattttctggattttttaaaa
ggagagtctgattctgaagagatgagggagatcgcgtcccaggtccgttatctggttgtt
gcaggagaccttgtggatggaattgggatctatcctgaccaggaaatggaactcgatatt
cttgatgtttatgaacagtacaggaaagcggccgattactttaaagaaattcccagacac
attcgtgtgattataagtcccggaaaccatgatgctgtacgccaggcagaaccgcagcct
gccctgcctgagaggatctgtgcggactttcctgaaaatgtcacattcgtaggcaaccct
gctcttgtggaccttgatggaatccgaatacttatctatcacggaaggtcgattgatgat
cttgtggcaagtgttccgggagtttcatatcatgagcctgcaggtgcagtccttgaaatg
cttaagcgcaggcatcttgctccaacatacggaagccgcgtttccatatccccggagaaa
aaagactattttataattgatccagttcctgatattattcacaccgggcacgtccatacc
ttgggagtccagcgctataaaaatgtccttctggtcaattccggaacatggcaggcacaa
actgagttccagaaacgtgtaaatctcgttccagtgccggctcgggttccagttgtggat
cttgcagattttgatgtaaagatcctggcattcgattaa
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