Methanococcus maripaludis DSM 2067: MMJJ_00350
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Entry
MMJJ_00350 CDS
T06430
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mmad
Methanococcus maripaludis DSM 2067
Brite
KEGG Orthology (KO) [BR:
mmad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmad03032
]
MMJJ_00350 (topA)
03400 DNA repair and recombination proteins [BR:
mmad03400
]
MMJJ_00350 (topA)
Enzymes [BR:
mmad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MMJJ_00350 (topA)
DNA replication proteins [BR:
mmad03032
]
Prokaryotic type
DNA Topoisomerases
MMJJ_00350 (topA)
DNA repair and recombination proteins [BR:
mmad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MMJJ_00350 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF8260
CoiA_N
FAM120A
ADK_lid
Motif
Other DBs
NCBI-ProteinID:
AVB75454
UniProt:
A0A2L1C7Y3
LinkDB
All DBs
Position
complement(32559..35030)
Genome browser
AA seq
823 aa
AA seq
DB search
MTGLIICEKPNVAKKIAEALGKPKKKSHNSVPYYELERNGESIVVASAVGHLYTLQEKTK
TKFGDYPVYDINWVPASTLDEKKYIQKYIDALKKVSKDANKFYVATDWDIEGELIGYHAL
NFSCGQKNAHRLRFSSLTKKEILKAYENPNEIDFGLVDAGDSRHKIDWYFGINVSRALMQ
AVSSVKRWKTLSTGRVQGPALAFLVDKELEIRNFVPTPYWVLEALLDNDLIAVHELEKFW
DEEQANKAYEKVKGQKQATVSDVKKSMKTIPPNPPFDLGALQREAHNMFRFSPKKTQEVA
QKLYEKGYCSYPRTSSQKLPDDKAYMDEVLKNLSKNKNYKPYIETILNENRKPISGKKDD
PAHPAVHAVDVPKEKLPDDELKLYELIARRTIALYWDNAKREYSKINLDINGETFKLSGS
RTVEEGWHEIYYYTKFDEIELPELKKNDVINVNNINFEAKETKPPKRYTMASIIKELEKR
KLGTKATRADILEKLTKRGYVIEDGSLTVTDLGIGVTETLRKYCPEIVEETLTRDLEDKL
ELIQDKKIKKEEVIQETKDKLTKILGEFRLKEKEIGTELVDKLDSTNRSLQIIGKCKCGG
DMIIIRTKGKKRFVGCSNYPDCEVTFPLPQKGRIKVLNEVCEKCQNPVIGLDRIKICVNP
DCSTRISEEDKKEIEKAEKEEKICPKCGNKLLIKKGPYGVFRGCENYPKCKYTEKLNGES
NEKEIVGKCPKCGSDLYKRKGRFGEFIGCSNYPKCRHTEKIDKKKEDTPGETKAETKKEA
KPKTAKKTAPKKTATKTTKTTAKKTATKKTTTKKATAKKTAEK
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgactggactaataatctgtgagaaaccaaacgttgctaaaaaaattgcagaagccctt
ggaaaaccaaagaaaaaatcccacaattcagtgccttattacgaattagaaagaaatgga
gaaagtatagtggtagcttcagcagtaggtcacttatacacgctccaagaaaaaaccaaa
actaaatttggagattacccggtttacgatataaattgggttccagcatcaacgcttgat
gaaaaaaaatacattcaaaaatatattgatgcactgaaaaaagtttcaaaagacgcaaac
aaattttatgttgcaacggattgggatattgaaggggagttaattggttaccatgcactg
aatttttcatgcggccagaaaaacgctcacagattaagattttcaagtttaactaaaaaa
gaaatcctgaaagcttatgaaaatccaaatgaaatagattttggactcgttgatgcagga
gacagcagacacaaaatcgactggtattttggtataaatgtttcaagagcacttatgcag
gcagtaagttcagttaaacgatggaaaaccctcagtacaggtagggttcagggtccagca
cttgcttttttagtagataaagaattagaaattagaaattttgttccaaccccatattgg
gtgcttgaagctcttttagataatgacttaattgcagttcacgagcttgaaaaattctgg
gatgaagaacaggcaaataaagcctatgaaaaggtaaaaggtcaaaaacaggcaacagtt
tcagacgttaaaaaaagcatgaaaaccatccctccaaatccgcctttcgatttaggtgca
ctgcaaagggaagcccacaacatgtttaggttttcccctaaaaaaacgcaagaagttgca
caaaaactttatgaaaaaggatactgttcatatccaagaacaagttcacaaaaacttcca
gacgacaaggcatacatggacgaagtcttgaaaaacctttcaaaaaataaaaattataaa
ccatacattgaaacaattttaaatgaaaatagaaaaccgatttcaggtaaaaaggacgac
cctgcacaccctgcggtacacgcagtagatgttccaaaggaaaaactgcccgatgatgaa
ttaaagttatacgaacttattgcaagaagaacaattgcactttactgggataacgctaaa
agggaatattcaaaaatcaatctcgatattaacggcgaaacatttaaattaagcggttca
agaaccgttgaagaaggatggcatgaaatatattactatactaaattcgatgaaatagaa
ctcccagaattaaagaaaaatgacgtaataaatgtaaataacataaatttcgaagcaaaa
gagacgaagcctccaaaaagatacacaatggcttcgattattaaggaacttgaaaaaaga
aaactcggaacaaaagctacaagagcagatatcctcgaaaaactaaccaaacgaggttat
gtaattgaagatggttctttaacggttacggatcttggaattggagttaccgaaacttta
agaaaatactgtccagaaattgttgaagaaacccttacaagagaccttgaagataaatta
gagcttattcaggacaaaaaaatcaaaaaggaagaagttatacaggaaactaaagacaaa
cttacaaaaatccttggagagttccgcttaaaagaaaaggaaatcggaactgaacttgtt
gacaaacttgattcgacaaataggtctttacaaataattggaaaatgtaaatgtggcgga
gacatgattatcatccgtacaaagggcaaaaaaagatttgttggatgcagtaactatcct
gactgtgaagttacattcccgctcccgcagaagggaagaatcaaagtattaaacgaagtc
tgtgaaaaatgccaaaatccagtaatcgggcttgatagaataaaaatttgtgtaaatccc
gactgcagtacaagaatttcagaagaagataaaaaagaaattgaaaaagctgaaaaggaa
gaaaaaatttgtccaaaatgcggcaataagcttttgattaaaaaaggaccttatggagtt
ttcagaggctgtgaaaactacccgaaatgtaaatatactgaaaaattaaacggggaatcc
aatgaaaaggaaatcgttggaaaatgcccaaaatgtggaagcgacctctataaaagaaaa
ggacgatttggagagtttattggatgcagtaactacccaaaatgtaggcatactgaaaag
atagacaagaaaaaagaagatacgccgggagaaactaaggcagaaacaaagaaagaagca
aaaccaaaaactgctaaaaaaacagctccaaaaaagaccgcaacaaagaccactaaaact
accgccaaaaagacggctacgaaaaaaaccacaactaaaaaagcaactgcaaagaagaca
gcagaaaaataa
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