Methanococcus maripaludis DSM 2067: MMJJ_04380
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Entry
MMJJ_04380 CDS
T06430
Name
(GenBank) DHH family protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mmad
Methanococcus maripaludis DSM 2067
Pathway
mmad03410
Base excision repair
mmad03430
Mismatch repair
mmad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MMJJ_04380
03430 Mismatch repair
MMJJ_04380
03440 Homologous recombination
MMJJ_04380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmad03400
]
MMJJ_04380
DNA repair and recombination proteins [BR:
mmad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MMJJ_04380
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MMJJ_04380
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MMJJ_04380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
AVB75855
UniProt:
A0A2L1C923
LinkDB
All DBs
Position
complement(413244..414539)
Genome browser
AA seq
431 aa
AA seq
DB search
MDILPIEDISKFNQITGKIKEKIENCDGLIRIVTHHDPDGLTAGSIMLKTLLRLNKNVHM
TILEHLSKESVEELSKESDKMFIFCDMGSGQINLINKFQFNAVILDHHPPEVAETEIGNI
LQLNPHLFGANGAKEISASGVCYLIARLFEYYDLATVAIVGAIGDMQHLPFIGLNKYILN
EARKYRYLSVIKDIVYNCYNLPISSSIYYSTQPYIRELDSIDKIKEILEELGINPEKKGI
TVAEKENLLEYFKSFNKNNELIADRYEINHKLNDAFYLSEVLNACGRKEMTSVGIGILLG
DDECIRQGENLYKKYKDELIEELKNVKLTSMENIEYFIGEKGKTGIISALMVKDKPVLGF
NEQGEIYKVSSRGSKELVECGLNLSEAMAVSKEFGGDGGGHNIASGAAIQKNYMNEFLEK
VNEIVGEQLKK
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggatatactcccgattgaagacatttctaaatttaaccagataactggaaaaataaaa
gaaaaaatagaaaattgtgacggattaataagaatcgttacacatcacgatcccgatggg
ctgaccgcgggttcaataatgttgaaaacacttctaaggctaaataaaaatgtgcacatg
actattttggagcatttatcaaaagaatcagtcgaagaactttcaaaagaaagcgataaa
atgtttatattttgtgacatgggaagcggtcagattaacctgataaataagtttcaattc
aatgcagtaattctggaccaccacccgccagaagttgcagaaaccgagattgggaatatt
ttacagttaaatcctcatttatttggggcaaacggtgcaaaagaaatttctgcaagtggt
gtttgttatttaattgcaagattgtttgaatattatgatttagcaactgttgcaattgtt
ggagcaattggggacatgcagcatctgccatttattggattaaataaatatattttaaat
gaagctagaaaataccgttatttgagcgttataaaagatattgtctataattgttacaat
ttaccaatttcaagttcaatatattactcaacccagccttatattcgagaattggatagt
attgataaaataaaagaaattcttgaagaattaggtataaatcctgaaaaaaaaggaata
actgtggctgaaaaagaaaatttgctcgaatatttcaaaagttttaacaaaaataacgaa
ttaattgctgatcggtacgaaataaatcataaattaaacgatgcgttttatctttccgaa
gttttaaatgcttgcggtagaaaagagatgacctcagtaggaattggaattttgcttgga
gatgatgaatgcatcagacagggcgagaatttatacaaaaaatataaagacgaactaatc
gaagaattaaaaaatgtaaaactaacctcgatggaaaatattgaatattttatcggggaa
aagggaaaaactggcataatatcagctttaatggtaaaagataagcccgtacttggattt
aatgagcagggcgaaatttataaggtttcttcgagaggcagtaaagaacttgttgaatgc
gggttaaatctttctgaggcaatggcagtttcaaaagaatttggtggagatggtggtgga
cacaatatcgcatcaggtgctgcgattcagaaaaactacatgaatgaatttttggaaaaa
gttaacgaaattgtaggcgaacagttgaaaaaataa
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