Methanococcus maripaludis DSM 2067: MMJJ_10550
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Entry
MMJJ_10550 CDS
T06430
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
mmad
Methanococcus maripaludis DSM 2067
Pathway
mmad03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mmad00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MMJJ_10550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmad03021
]
MMJJ_10550
Transcription machinery [BR:
mmad03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
MMJJ_10550
Prokaryotic type
Archaeal type
TFB
MMJJ_10550
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Lar_restr_allev
HTH_AsnC-type
UPF0253
RPA_interact_C
ORC6_2nd
BRF2-like_C_cyclin_rpt
Zn_ribbon_LysW
Ribosomal_S27e
Motif
Other DBs
NCBI-ProteinID:
AVB76453
UniProt:
A0A2L1CAW7
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All DBs
Position
966032..967051
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AA seq
339 aa
AA seq
DB search
MKIESVTKEDTKKPERKIKIAIAKPEDYSNKNVILEKEEELICPVCGSKSIIKDYERAEI
VCEMCGCVLQQNLFDVGPEWRAFDHEQRVKRSRVGAPMTYTIHDKGLSTVIDWRNKDSYG
KDISADKRAQLYRLRKWQRRIRVSDASERNLAFALSELDRIASKLGLPRNVRENAAVLYR
GAVEKGLIRGRSIEGVAAAALYAACRRCKVPRTLDEIAEVSRVDRKEIGRTYRFISRELN
IRLAPTNPVDYVPRFASELKLPGEVESKAISILQKAGERGLTSGRGPTGVAAAAIYIASV
LQGTRRTQREVADVAGVTEVTIRNRYKELTEHLDIDVTL
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgaatctgttacaaaagaagatactaaaaagcctgaaagaaagattaaaatt
gctatcgcaaagcctgaagactactcaaataagaatgttattttagaaaaggaagaagaa
ttaatctgtcctgtctgtggtagtaaaagtattattaaagattatgaacgggctgaaatc
gtttgtgaaatgtgtggatgtgttttacagcagaatttatttgacgtgggtcctgaatgg
agagcctttgatcacgaacagcgtgtaaaaagaagtagggttggagctccaatgacttat
acaatccacgataaaggtttatcaacagttatcgactggagaaataaagacagctacgga
aaagatatttctgcagataaaagagctcaactttatagattaagaaaatggcagagaaga
atcagggtttctgatgcatctgaaagaaacttagcttttgcactttccgaacttgacagg
atagcttcaaaattgggtcttccaagaaacgttagggaaaacgctgcagttctttacagg
ggtgctgttgaaaaagggctcattaggggaagaagtattgaaggtgttgccgctgctgca
ctctacgctgcatgcagacgatgtaaagttccaagaactcttgatgaaattgcagaagtt
tcaagagtggatagaaaagaaattggaagaacatatagatttatttcacgagaattaaac
atcaggcttgctccaacaaatcctgtggattatgttccaagattcgcttcagaattaaaa
cttccaggagaagttgaatcaaaagcaatatcaatcttgcaaaaagcaggagaacgtggt
cttactagtggtagaggacctacgggagttgccgctgctgcaatttatattgcaagtgtt
ttacagggaactagaagaactcagagagaagttgcagatgttgcaggagttactgaagtt
acaataagaaataggtacaaagagctaacagaacacttagatatcgatgtaacattataa
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