Methanococcus maripaludis DSM 2067: MMJJ_10860
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Entry
MMJJ_10860 CDS
T06430
Symbol
truD_2
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mmad
Methanococcus maripaludis DSM 2067
Brite
KEGG Orthology (KO) [BR:
mmad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmad03016
]
MMJJ_10860 (truD_2)
Enzymes [BR:
mmad01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
MMJJ_10860 (truD_2)
Transfer RNA biogenesis [BR:
mmad03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MMJJ_10860 (truD_2)
Prokaryotic type
MMJJ_10860 (truD_2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruD
ATP13
DUF4211
Motif
Other DBs
NCBI-ProteinID:
AVB76480
UniProt:
A0A2L1CB81
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All DBs
Position
1000414..1001583
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AA seq
389 aa
AA seq
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MKFRQKHEDFIVTEILDYELNDYGNYFLYKLQKNGIENLKAISYLSKNFEVPTKEIGYCG
LKDRHAITTQYVSIPKEYGKLSLDEDNLKLEYVGTIEKPLKIGRLYGNRFEIIARAIDKD
EFLKIADNIRTLSSGAPNYYDDQRFGSVFNGKFIAKEILKGNYEEVVKILLTSYTKSEKK
QLKDLKRFIAKNWGNWDECLKYIDKKQIRSKMFRNMVKSLTYENDFKKAFKYVDNRLKEL
FISAYQSYLWNECLKEFLKEVIPKENRIYVDYSCGTFLFYENIDEELFVKLKEMDFPTIV
SDVEYTDSEKRIIKAILKKERIKISDFEKLDFGKLKYTKRLIISIPEDVNTGKFKSDELN
SKKYKIDLEFSLKKGSYATIILKRVFNIL
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttagacaaaaacacgaagatttcattgtaactgagattttagactatgaattg
aatgattacggaaactattttctgtataaacttcaaaaaaacggaatagaaaatttaaag
gcaatttcatatctttcaaaaaattttgaagttcctacaaaagaaattggctactgtggt
ttgaaggacaggcacgcaatcacaactcaatatgtttcaattccaaaagaatatggtaaa
ttatcccttgacgaagataatttaaagcttgaatatgttggaaccattgaaaaaccctta
aaaattggaagattatatggaaacaggtttgaaatcatagcaagggctatcgataaagac
gaatttttaaaaattgcagataatatacgaactttaagttctggtgcgccaaattactac
gatgatcagagatttggaagtgtatttaacggtaaatttatagcaaaggagattttgaaa
ggcaattatgaagaagtcgttaaaatacttttaacaagctatacaaaaagtgaaaaaaag
caattaaaggatttaaaacgatttattgccaaaaattggggcaactgggatgaatgctta
aaatatatcgataagaagcagataagaagtaaaatgtttagaaatatggtaaagtcttta
acatacgaaaatgattttaaaaaagcgtttaaatatgttgataatcggttaaaagagcta
tttatctccgcatatcaaagttacctttggaacgaatgcttaaaagagtttttaaaagaa
gttattccaaaagaaaatagaatatatgttgattattcctgcggaacatttttgttttac
gaaaatattgacgaagaattgtttgttaaattaaaagaaatggattttccaacgatagtt
tcagacgtagagtacactgattcagaaaaaagaataataaaggcaattttgaaaaaagaa
cggattaaaatttcagattttgagaaattggattttggaaaattaaaatacacaaaaaga
ctgattatttcaattcctgaagatgtcaatactggaaagttcaaatctgacgaattaaac
tcaaaaaagtacaaaatagatttagaatttagtttaaagaagggaagctatgcaactata
attttaaaaagggtttttaatattttataa
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