KEGG   Methanococcus maripaludis DSM 2067: MMJJ_11180
Entry
MMJJ_11180        CDS       T06430                                 
Name
(GenBank) DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
mmad  Methanococcus maripaludis DSM 2067
Pathway
mmad03030  DNA replication
mmad03410  Base excision repair
mmad03420  Nucleotide excision repair
mmad03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mmad00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MMJJ_11180
   03410 Base excision repair
    MMJJ_11180
   03420 Nucleotide excision repair
    MMJJ_11180
   03430 Mismatch repair
    MMJJ_11180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mmad03032]
    MMJJ_11180
   03400 DNA repair and recombination proteins [BR:mmad03400]
    MMJJ_11180
DNA replication proteins [BR:mmad03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MMJJ_11180
DNA repair and recombination proteins [BR:mmad03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MMJJ_11180
   MMR (mismatch excision repair)
    Other MMR factors
     MMJJ_11180
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    MMJJ_11180
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad9 Rad1 Chalcone_3 Fe-S_biosyn
Other DBs
NCBI-ProteinID: AVB76506
UniProt: A0A2L1CC89
LinkDB
Position
1037683..1038435
AA seq 250 aa
MFRATCNTRDFKKVINATSNLVDEICFEVDENGIKASAMDPSHVALVSMEMPKDVFEEYE
GDIQDIGIDLEALKKIIARGRGDEKLILDLDVEKNKLNITFKSNVTRKFSIALYDVSSSN
LKVPDIEYPNSVSIKAGAFVEALKDAELVNDHITLKIDENKFVIYSKGDLNQSETVFDNS
IDDDDNALADFNMGEASRSTFNLAYLKDLTKSTAAEDLLKIYLGSDMPVKIEYEVSGSKL
VFLLAPRIES
NT seq 753 nt   +upstreamnt  +downstreamnt
atgttcagggctacatgtaatacaagagattttaaaaaagttataaatgcaaccagcaat
ttagtagatgaaatttgttttgaagtggacgaaaacgggatcaaggcaagcgcaatggac
ccgtcgcacgtggcgttagtgagcatggaaatgccaaaagacgtttttgaagaatatgaa
ggcgatattcaagatatcggaattgatttagaagcacttaaaaaaatcattgcaagagga
aggggcgacgaaaaattaatcctggatcttgatgtagaaaaaaataaattaaatattact
tttaaaagcaacgttacaaggaagttttcaatcgcgttatacgatgtttcatcaagtaat
ttaaaagttccggacatcgaatatccaaacagcgtttcaatcaaagcgggtgcatttgtt
gaagcattaaaagatgcagaacttgtaaatgaccacataaccttgaaaatcgatgaaaat
aaatttgtaatttattcaaaaggcgatttaaaccagagtgaaaccgtatttgacaacagc
attgacgatgacgacaacgctcttgcagactttaacatgggtgaagcttcaagaagtact
ttcaatttagcttatttaaaagatttaacaaaatcaaccgctgcagaagatcttttaaaa
atatatcttggttctgatatgcctgtaaaaatcgagtacgaagtaagcggttcaaaactt
gtattcttacttgcaccaagaattgaatcctaa

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