Methanococcus maripaludis DSM 2067: MMJJ_14980
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Entry
MMJJ_14980 CDS
T06430
Name
(GenBank) putative DNA double-strand break repair Rad50 ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mmad
Methanococcus maripaludis DSM 2067
Brite
KEGG Orthology (KO) [BR:
mmad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmad03400
]
MMJJ_14980
DNA repair and recombination proteins [BR:
mmad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MMJJ_14980
Archaeal homologous recombinant proteins
MMJJ_14980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_29
SbcC_Walker_B
AAA_21
Rad50_zn_hook
ABC_tran
AAA_27
MukB
DEAD
Motif
Other DBs
NCBI-ProteinID:
AVB76876
UniProt:
A0A2L1CD89
LinkDB
All DBs
Position
complement(1363985..1366966)
Genome browser
AA seq
993 aa
AA seq
DB search
MIIKNIKMENFRSHRNTSINFNKGITSIIGQNGSGKSSIFQAMNFALFAPRGNNFRIENL
MQQGSASFSVELEFEMMGNTYLVKRKRFQNKTDDKLYVNGKLNAESASEINKKMEEILEI
DNSVFSNAIYIKQGEIANLIQMTPRDRKEVIGKLLGIEKYEKASEKMNIVKKSYEETLLK
LEGELTQEPEILENLEKLKIEVSESEILKEEILKKYGNLEKLKLEKNSELTHMEEKFAEN
NRLKENLKDVISEIKNINLEIQNFKNSLSLVVEESKNISKNEENYKKYLELELNIKELKN
KLINHKSNYESYNKLKTIEESLIKELNNLEESLKDNKKNPDELKENLKENEEKILILDKI
KEKIKELEFIEKQIYEIKIHKKTVETLFDSVKIYDDSIKTFEELKTKKNSYENLLKEKND
LEKKFQNETDEKTKLISELTDLKKIEEKINLEIEFKEKYEDLSEKIDKLNEIVLKKESKI
SETKNSKAELEKTKDSCHVCQSKISEEKKQELLEKYNSEIENEKLSTESLKKQLEIILNK
KEHIKVKLNEIDSFKLKYGELKEKKNYSLKVEESIIETTEKLNELIGKINEYSSLNDEIS
LIENKLKDLEKDYKNYNYSAQFLTKNEESEILNKKLELSKIIGDYDSSKIENEKKSLENL
KDELKNIIYNLEREINLKTELKNIQNDISSKIGIVECYVKWEAEKSDFENKLSECKKSYE
KYMESLAVLKNYSKTYSVEINNLNEFLNQKIAEKEHFCEKLLETRLTIEKNIQSVNYNPE
MHENAKKVYENIFNEFNDISRTLERITSELKLKNENIIYLNEKIQNLSNKKEERRKIEEF
KEYLDKIKREIFSKDGFQKYLREKYIPLIQRHTNQIFQEFELPYSHIQLKDDYSLIVDGL
PVETLSGGEQIAVSLALRLGISKAVCNNIECIILDEPTAYLDEDRRKNLLNIFKNIKTIN
QMAIITHHQELEQIADNIVKVRKIGENSKISLE
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgattattaaaaatatcaaaatggaaaacttcagaagccacagaaacacctcgataaat
tttaacaaaggaataacttcaataattgggcaaaatggaagtggaaagtcgtcaattttt
caagcaatgaattttgcactttttgctccgcgtggaaacaattttaggattgaaaattta
atgcaacagggctctgcatctttttctgtagaattagaatttgaaatgatgggaaataca
tatcttgtaaaaagaaaaaggtttcaaaataaaacagatgacaaattatacgttaacgga
aaattaaatgcggaatctgcatctgaaatcaacaaaaaaatggaagaaatattagaaatt
gataacagcgtattttcaaatgcaatatatataaaacagggcgaaattgcaaatttaatc
cagatgactccaagagatagaaaagaggttattggaaagcttcttggaattgaaaaatat
gaaaaagcctctgaaaaaatgaatattgtaaaaaagagctatgaagaaacgcttttgaaa
cttgaaggggagctaactcaggaacctgaaattttggaaaatcttgaaaaattaaaaatt
gaagtttctgaatctgaaattttaaaagaagaaatattaaaaaaatatggaaatttagaa
aaactaaaacttgaaaaaaattcagaattaacccatatggaagaaaaatttgctgaaaat
aaccggttaaaagaaaatttaaaggatgttatttcagaaattaaaaatataaatttagaa
attcaaaatttcaaaaattcactaagtttagttgttgaagaatcaaaaaacatatctaaa
aatgaagaaaattacaaaaaatatttagaacttgaattaaacattaaagaattgaagaat
aagttaataaaccacaaatccaactatgaatcatataataaactaaaaacaattgaagaa
tcgttaataaaagaattaaataacttagaagaatctttaaaagataataaaaaaaatcct
gatgaattgaaagaaaatttaaaagaaaatgaagaaaaaattctaattttggataaaata
aaagaaaaaattaaggaattagaatttattgaaaaacagatttatgaaataaaaatccac
aaaaaaacagtggaaactctttttgatagtgttaaaatttacgatgactcgattaaaact
tttgaagaactaaaaactaaaaaaaatagttatgaaaatcttttaaaagaaaaaaatgac
cttgaaaaaaaatttcaaaacgaaactgatgaaaaaacaaaattaatttctgaattaact
gatttaaaaaaaatagaagaaaaaataaatctagaaattgaatttaaagaaaaatatgaa
gatttatctgaaaaaatagataaattaaatgaaatcgttttgaaaaaagaaagtaaaatt
tcagaaactaaaaattctaaagcagagcttgaaaaaaccaaagattcgtgtcatgtgtgt
cagtccaaaataagtgaagaaaaaaagcaggaattacttgaaaaatataattctgaaatt
gaaaatgaaaaattatcaactgaaagtcttaaaaaacagcttgaaatcatattaaacaaa
aaagagcatatcaaagttaaattaaatgaaattgattctttcaaattaaaatacggggaa
ttaaaagaaaaaaagaattattctttaaaagttgaagaatcgataatcgaaactactgaa
aaattaaacgaattaattggaaaaattaacgaatattcttcactgaatgacgaaataagt
ttaattgaaaataaattaaaagatttggaaaaagattataaaaattacaattattctgcc
caatttttaactaaaaatgaagaatctgaaattttaaataaaaaattggaactttcaaaa
attattggagattacgattcttcaaaaattgaaaatgaaaaaaaatcccttgaaaattta
aaagatgaattaaaaaacattatttacaatttagaaagagaaattaacctaaaaacggaa
ttaaaaaatattcaaaacgatatttcttcaaaaattggaattgttgaatgttacgttaaa
tgggaagctgaaaaatcagattttgaaaacaaattatcagaatgtaaaaaaagttatgaa
aaatatatggaaagtctggcagttcttaaaaattattcaaaaacatattctgttgaaata
aacaatttaaatgagtttttaaaccaaaaaattgctgaaaaagagcatttttgtgaaaaa
ctccttgaaacacgattaacaattgaaaaaaatattcagagcgtaaactacaatcctgaa
atgcatgaaaacgctaaaaaagtttatgaaaatatatttaatgaatttaatgatatttca
agaactttagagagaataacttctgaattaaaacttaaaaatgagaatataatttattta
aatgaaaaaattcaaaatctgtcgaataaaaaagaagaaagaagaaaaattgaagaattt
aaagaatatctcgataaaataaaaagagaaatcttttcaaaagatggttttcagaagtat
ttaagagaaaagtatattccattaattcaaaggcacacaaaccagatttttcaggaattt
gaacttccatattcgcatatccagttaaaagacgattacagcttgatagttgacggcctt
cctgttgaaaccttgagtgggggggagcagattgcagtatctcttgcattaaggcttgga
atttctaaagcagtatgtaataatatcgaatgtatcattttagatgaaccaacagcgtat
ctcgatgaagataggcgtaaaaatcttttaaatatattcaaaaacataaaaacaataaac
cagatggcaataattacacaccatcaagaactcgaacagattgcagataacattgtaaaa
gttagaaaaatcggcgaaaattcaaaaatatctttagaatag
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