Methanococcus maripaludis DSM 2067: MMJJ_17130
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Entry
MMJJ_17130 CDS
T06430
Name
(GenBank) tRNA-splicing endonuclease subunit alpha
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
mmad
Methanococcus maripaludis DSM 2067
Brite
KEGG Orthology (KO) [BR:
mmad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmad03016
]
MMJJ_17130
Enzymes [BR:
mmad01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
MMJJ_17130
Transfer RNA biogenesis [BR:
mmad03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
MMJJ_17130
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Sen15
Motif
Other DBs
NCBI-ProteinID:
AVB77084
UniProt:
A0A2L1CCL8
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All DBs
Position
complement(1564967..1565497)
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AA seq
176 aa
AA seq
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MAKPKKTIPAKLSDERIVIYDKDGISRLNEKRYGELHENFLSLSFVEGLYLVSKNWISLR
DKKNKLLSFEELFDVAQNIDIKLCIRYLAYKDLRNRGYTVRTGLKYGSDFRLYERSNIDE
IHSRYLVKVFSEEIPCEISEITGFVRVAHSVRKELIIAIVDADGSVVYYNMGYLKL
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacctaaaaagacaatacctgcaaaactctcggatgagagaattgtaatttac
gataaagacggaatatctcgtttaaatgaaaaaaggtacggagaacttcacgaaaacttt
ctttcactttcatttgtggaagggctctacctagtatctaaaaactggatatccttgaga
gataaaaaaaataaacttctttcttttgaagaattattcgacgttgcacagaatattgat
ataaagttgtgcattcggtatcttgcatacaaagacctaagaaacagaggatatactgtt
cgaactggtttaaaatacggttctgattttagactttatgaaagaagtaatattgatgag
attcactcaagatacctcgtaaaagttttttcagaagaaattccttgcgaaatttcagaa
attacgggattcgttagggttgcacactccgttagaaaagaattaattattgcaatagtt
gatgctgatggaagcgtcgtctactacaacatgggatatttaaagctttaa
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