Methanococcus maripaludis DSM 2067: MMJJ_18200
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Entry
MMJJ_18200 CDS
T06430
Name
(GenBank) replication factor A
KO
K07466
replication factor A1
Organism
mmad
Methanococcus maripaludis DSM 2067
Pathway
mmad03030
DNA replication
mmad03420
Nucleotide excision repair
mmad03430
Mismatch repair
mmad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MMJJ_18200
03420 Nucleotide excision repair
MMJJ_18200
03430 Mismatch repair
MMJJ_18200
03440 Homologous recombination
MMJJ_18200
03460 Fanconi anemia pathway
MMJJ_18200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmad03000
]
MMJJ_18200
03032 DNA replication proteins [BR:
mmad03032
]
MMJJ_18200
03400 DNA repair and recombination proteins [BR:
mmad03400
]
MMJJ_18200
Transcription factors [BR:
mmad03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
MMJJ_18200
DNA replication proteins [BR:
mmad03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
MMJJ_18200
DNA repair and recombination proteins [BR:
mmad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
MMJJ_18200
MMR (mismatch excision repair)
MMJJ_18200
DSBR (double strand breaks repair)
HR (homologous recombination)
MMJJ_18200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
CDC24_OB3
OB_Ssb-like
Rep_fac-A_C
DUF3127
OB_POT1A
OB_MEIOB_N
DZR_2
Zn_Ribbon_TF
FYVE
DUF2536
Motif
Other DBs
NCBI-ProteinID:
AVB77190
UniProt:
A0A2L1CD91
LinkDB
All DBs
Position
1668422..1670350
Genome browser
AA seq
642 aa
AA seq
DB search
MNIDKLKQKILSKISEKELEKKVNEKIEENSGLLGEESAVMLVAQELGIEITYGDDEEEY
DFSIKDIADGQKNVEVTGKIIEISPAKDFNRKDGSTGKLASVTIGDNTGITRLTLWNDKT
DLIEGLKKGDVVKIENAFSRKWNDKVELNSGSELSIEKLKKYDESRYPILKDNYKISELM
PNLSGTINAEVVAAYPKKEFSRKDGTKGQLKSLFLKDDTGSIRGTLWNELADFEVKKGDI
AEVSGYVKQGYSGLEISVDNIGIIEKSVKEEKPVEKLSISELTSFDGEYVTVSGNIVNIS
GSREVKFSDRTAEVQDIYINDGTGMVKTAFWGTNRSILDGLKEGDYVTISNAKLRTYTDN
TGEKRADLTYNYMSELKKDETASKKILEEITEIKDILNGSADNSDVTVVAMVTNAYPVNE
FQRSSGGTGKVRNIMLEDGTGSIRMALWDSDAETEISEGDVVKLIHGYAKESGEYMDLST
GRFGRIEVNPKGVSIKSPRNYIADLEEGVSTEINGTIVDYRKQDVILNLCPNCRKRLNLV
DNKYLCEVCGEVEPNELLVSNLTVDDGTGVINCRVYGNNVEKVTELSKNKLKEMNMDALA
DVLGKDVLFYGTPSFRNDDLEFAVKRVNFVDVSKELEVLKQL
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgaatattgacaagttaaaacaaaaaatattatcaaaaatctcagaaaaagagcttgag
aaaaaagtaaatgaaaaaatcgaggaaaattccggacttcttggtgaagaaagtgcagta
atgctagttgcacaggaactcgggatagaaataacttacggcgacgatgaagaagaatat
gatttttcgattaaagatatcgctgacgggcagaaaaatgttgaagtcacaggaaaaatt
attgaaatttcacctgcaaaagactttaaccgaaaagatggaagcactggaaaacttgca
tcagttactatcggggacaatactggaattaccagacttacgctttggaacgacaaaacg
gatcttattgaaggcttaaaaaaaggggatgttgtaaaaattgaaaatgcatttagcaga
aagtggaatgacaaagtcgaattaaacagcggttcagaattatcgattgaaaaacttaaa
aaatacgatgaatcgagatatcctattttaaaagataattataagatttcagaattaatg
ccgaatttatcaggaacaattaatgcagaagttgttgcagcatatcctaaaaaagaattc
agcagaaaagatggaacaaaaggtcagctaaaatctttatttttaaaagatgatacagga
agtataaggggaactctctggaatgaacttgcagattttgaagttaaaaaaggagatatc
gcagaagtaagcggttatgtaaaacagggttattccggacttgaaatttctgttgataat
attggaataattgaaaaatccgttaaagaagaaaaacctgttgaaaaattgagtatttct
gaacttacaagctttgatggagaatacgttacagtttctggaaatattgttaacatttca
ggttcaagagaagttaaatttagtgacagaactgcagaagttcaggatatttacataaac
gatggaactggaatggtaaaaactgcattttggggtacaaacaggagtattcttgacggc
ttaaaagaaggagattacgtaacaatctcaaatgctaaattaagaacctacactgataat
actggtgaaaaaagggctgatttaacttataactacatgtcagaacttaaaaaagacgaa
actgcaagtaaaaaaatattagaagaaataaccgagattaaagatattttgaatggaagt
gcagacaactccgatgtaacagttgttgcaatggttacaaatgcatatcctgtaaatgag
ttccaaagaagcagcggtggaactggaaaagttagaaatattatgttagaagatggaact
ggaagcataagaatggctttatgggatagtgacgcagaaaccgaaatttccgaaggagat
gttgtaaagctaatacacgggtatgctaaagaaagcggagaatacatggatttatcaacc
ggaaggtttggaagaatcgaagtaaatccaaaaggagtttcaataaaatcccctagaaat
tatatcgcagaccttgaagaaggagtttcaaccgaaattaacggaactatcgtggactac
cgaaaacaagatgtaattcttaatttatgtccaaactgtagaaaaagactgaatctggtt
gataataaatacctgtgcgaagtttgtggggaagttgaaccaaatgaacttctggtttca
aatttaacagttgatgatggtacaggcgttattaactgtagggtatatggaaataatgtt
gaaaaagtaactgaactttcaaaaaataaattaaaagaaatgaatatggatgcacttgca
gatgtgcttggaaaagatgttttattctatggaaccccttcatttagaaatgatgacttg
gaatttgcagtaaaacgggttaatttcgtagatgtatcaaaagaattggaagttttaaag
caactttaa
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