Mycobacterium marinum E11: MMARE11_13260
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Entry
MMARE11_13260 CDS
T04774
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mmae
Mycobacterium marinum E11
Pathway
mmae03420
Nucleotide excision repair
mmae03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mmae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MMARE11_13260
03430 Mismatch repair
MMARE11_13260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmae03400
]
MMARE11_13260
Enzymes [BR:
mmae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MMARE11_13260
DNA repair and recombination proteins [BR:
mmae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MMARE11_13260
MMR (mismatch excision repair)
Other MMR factors
MMARE11_13260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
AlkA_N
Motif
Other DBs
NCBI-ProteinID:
CDM75474
LinkDB
All DBs
Position
1594440..1597748
Genome browser
AA seq
1102 aa
AA seq
DB search
MNPRYSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGY
AEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGTTVGVAVGEAAGAPTVSTYHAFAGSLLR
DHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAVTATVLRLWGQLAEHLV
DTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALHERMRA
AKVMDFGMQMAAAARLAATCPQVGEELRSRYRVVLLDEYQDTGHSQRIALSALFGGGVDD
GLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRALHLAN
AISAEARRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRAAADGVSP
PTAAVLVRRNADAAPIADALVARGIPVEVVGLAGLLSIPEVADLVAMLRLVGDPTAGAAA
MRVLTGPRWRLGGSDVAALWRRAVALVGGPQVGASASPGAVAAAAAGPDTDTACLADAIC
DPGPADWYSPAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGLDCDVRAAATASGA
WAGAEHLDAFADVVADYAERAATSAGSALSTKASVDGLLAYLDVAAEVENGLPPAQLTVA
RDRVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPGELPPLLRGDRASAGAL
GIPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVTRAEDTVLVSGHHWGAT
GLKPRGPSDFLCELKDIIERSAAAGDPCGTVDQWDPAPAAGERNPLLDDVVEAVWPTDPL
ATRRGDVERGASLVAEAISADAGVEAPAGGAVVADIEGWTADVDALLAERARAVGPPTRA
LPNQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGNAFHTWVQQFYGAELLFDLGD
LPGAADSDVGQVEDLAPLQEAFAGSHWAARTPIAVEVPFEMPVGDTVVRGRIDAVFEDPD
GGATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESSVRTAFHYVRTGVTVIP
DELPDGMALAELLADSDPPCSC
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgcgctacagcccggatgagatagcaagtgcgctaggaattttcccgcccacc
gacgagcaggccgccgttatcgccgcccctccgggtccgttggttgtcatcgcgggcgcg
ggagcgggcaagaccgagacgatggccgcccgggtggtttggctggtcgccaacggctac
gccgaaccaggccaggtgttgggcttgacgttcacccgcaaggctgccggccaattgctg
cgccgcgtccggtcgcggctggcccgattggcaggtaccaccgtgggtgtcgccgtcggc
gaagccgcgggtgcgcccacggtcagcacttatcacgcatttgccggctcactgctgcgt
gaccacggcttgttgctgcccatcgagcccgacacccggttgctcagcgagacagagctg
tggcagctggcgttcgaggtcgtcaacggatatcgcggagagctgtgcacccagaagacc
ccggcggcggtcaccgccacggtgctgcggctgtggggccagctcgccgagcacctggtt
gacacccggcagcttcgcgatacccacatcgagctggaacgactcgtgcacgccctgccg
gcgggcccaaaccagcgcgatagcggcccgaatcagtggctgttgcggatgctggccacc
cagaccgagcgggccgagctggtgcccttgctcgacgcgttgcatgagcggatgcgcgcc
gccaaggtgatggacttcggaatgcagatggccgccgccgcacggctggcagcgacgtgc
ccgcaggtcggcgaggagctgcgcagccggtaccgcgtcgtgttgctcgacgagtaccag
gacaccggacactcccagcgcatcgcgctgtcggcactgtttggtggcggcgtcgatgac
gggttggcgttgacggcagtcggtgatccgattcagtcgatctacggctggcgtggtgcc
tcggcgacgaacttgccccggttcagcacggatttcgcgctgtccgacggtgccccggca
ccggttctggagctgcggaccagctggcgcaacccgccgcgcgcactgcacctggcaaac
gcgatctcggcggaggcccgccggcggtcggtggccgtacatgcactgcgttcgcgcccg
gatgcgccggccgggacggttcgttgtgcgctacttgccgatgtgcaggccgaacgggac
tggatcgcagaccaattgcagggtcactatcagcgcgcggcggccgacggggtgagcccg
ccgacggcagcggtgctggtgcgccgcaacgccgacgccgcacccatcgccgatgcactg
gttgcgcggggaatcccggttgaggttgtcgggctggccggcctgttgtccattccggag
gtggccgacctggtagcgatgctgcgactggtgggtgacccgacggccggggccgcggcg
atgcgagtgttgaccggtccgcgctggcggttgggcggcagcgacgtcgccgcactttgg
cgacgggcggtcgcgttggtgggcggtcctcaggtgggcgcatcggcctctcccggcgcc
gtcgcggcggcggcggcgggtccggacaccgatacggcgtgtctggccgatgccatctgc
gacccgggccccgccgactggtactcgccggcgggctacgagcgcatcggtgcgctggca
gcggaattgaacgccctgcgtgggcatcttggtcattggctgccggatcttgtcgccgag
gtacgacgcgtgcttgggctggattgcgatgtccgtgccgcggcgacggcttcgggggca
tgggccggtgccgagcacctcgatgcgtttgccgacgtggtcgccgactacgccgagcgg
gccgccacctcggctggtagcgccctgtccaccaaggcatcggtggacggtctgctcgcc
tatctcgatgtcgcggcggaggtagagaacgggttaccgccggcccagttgacggtggca
cgggaccgagttcaagtgctcaccgtgcatgccgcgaagggcctggaatggcaggtggtg
gcggtggcacatctatcggcaggtgttttcccgtcgaccgcgtcgcgaagcagttggctc
accgatccgggcgagttgccgccgctgcttcggggggaccgggcgtcggcgggagcgctg
ggcatcccggtgctggatacctcggcggtgaccaaccgaaagcagctgtcggacaccatt
tccgcgcatcgggaacagctggatcagcggcgcgtcgatgaggagcgccggttgctctac
gtcggcgttacccgggccgaggacaccgtgctggtatcgggtcaccactggggggccacc
gggctgaagccgcgcggaccatcggacttcttgtgcgaactcaaggacatcatcgagcgg
tcggccgcggccggcgatccctgcgggacggtggatcagtgggatccggcaccggccgct
ggtgaacggaacccgctgctggacgacgtcgtcgaagcggtttggccaactgatccgttg
gccacgcgacgcggcgatgtcgagcgtggggcgagcttggtcgcggaggcgatctctgcc
gatgccggtgtcgaggcccccgctggcggtgccgtggtcgccgatatcgagggctggacc
gccgacgtcgatgcgctgttggccgagcgggcgcgtgccgtggggccgccgacgcgagcg
ttgccgaaccagttgtcggtgagcgggctcgtcgagctggcccgcgacccggtgggggcc
aggcaacggttggtgcaccgcttaccgacccggccggatccgcatgcccagctgggcaat
gcctttcacacatgggtacagcagttctacggcgcggagctgctgttcgacttgggggac
ctcccgggtgctgccgactccgatgtgggccaagtcgaggatctggcgccgttgcaggag
gctttcgccggatcgcattgggcggcgcgcacgccgatcgccgtcgaggtgccattcgaa
atgccggtcggcgacaccgtggtgcggggccgcatcgacgcggtattcgaagaccccgat
ggcggcgcaaccgtcgtcgactggaagaccggtgagccgccgcgtgggcccgaagccatg
cggcaagccgctgtgcagctggctgtgtaccggatggcgtgggccgccctgcgcggatgc
cccgaatcgtcggtgcgtaccgcctttcactatgtgcgcaccggagtcaccgtcatcccc
gatgagctgcccgatgggatggcgttggctgagctgctcgccgactccgatccgccttgc
agttgctaa
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