Mycobacterium marinum E11: MMARE11_13310
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Entry
MMARE11_13310 CDS
T04774
Symbol
uvrD2
Name
(GenBank) ATP-dependent DNA helicase II UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mmae
Mycobacterium marinum E11
Pathway
mmae03420
Nucleotide excision repair
mmae03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mmae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MMARE11_13310 (uvrD2)
03430 Mismatch repair
MMARE11_13310 (uvrD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmae03400
]
MMARE11_13310 (uvrD2)
Enzymes [BR:
mmae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MMARE11_13310 (uvrD2)
DNA repair and recombination proteins [BR:
mmae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MMARE11_13310 (uvrD2)
MMR (mismatch excision repair)
Other MMR factors
MMARE11_13310 (uvrD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
ORC-CDC6-like
AAA_11
Helicase_Sgs1
C1_1
Motif
Other DBs
NCBI-ProteinID:
CDM75479
LinkDB
All DBs
Position
1601275..1603404
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AA seq
709 aa
AA seq
DB search
MSARTVKMETMPTLAQPLTAGLDDEQREAVLAPRGPVCVLAGAGTGKTRTITHRIAQLVA
SGHVAAGQVLAVTFTQRAAGEMRARLRGLDAAAQTSSGVGAVQALTFHAAAHRQLRYFWP
RVVGDIGWQLLDSKFAVVARAAGRARLNASSDNVRDLAGEIEWAKASLITPEQYPAAVAA
ASRDTPLDAAQIAAVYAEYESLKVRDESLTLLDFDDLLLHTAAAIENDAAVAQEFRDRYR
CFVVDEYQDVTPLQQRVLLAWLGDRDDLTVVGDANQTIYSFTGASPRFLLDFSRRFPDAT
LVRLERDYRSTPQVVSLANRVIAAARGRVAGSRLQLTGQRAPGPAPSFDEYPDEVAEATA
VAASIARLIQSGTPASEIAILYRVNAQSEVYEEALTEAGIAYQVRGGEGFFNRQEVKQAM
VALQRAAERDVEAALPDVVRTVLEPLGLTAEEPAGTRARERWEALSALAQLVDDEVAQRP
HLQLAGLLAELRARADARHPPVVQGVTLASLHAAKGLEWDAVFLVGLADGTLPISHALAH
GPESEQVEEERRLLYVGVTRARVHLALTWALARSPGGRQGRKPSRFLNGIAPQTRADPGP
AKNRRNRGPVRCRICNKELTTPAALMLRRCETCAGDVNEELLLQLKSWRLNTAKEQNVPA
YVVFTDNTLIAIAELLPADDASLIAIPGIGARKLEQYGADVLELVRQAR
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
ttgtcagcccgcactgtcaagatggagaccatgccgacgctcgcacagccactgaccgcc
gggctggacgacgagcaacgcgaagccgtgctcgcgccccgcggacccgtctgcgtgctc
gccggggccggaaccggcaagacgcgcaccatcacgcatcggattgctcagttggtcgcg
agcggccatgtcgccgccggccaggtactcgcggtgacattcacgcagcgggcggcgggg
gagatgcgcgcccggttgcgagggctggatgccgcggcacagacaagctccggtgtcggt
gccgtccaggcgctgacgtttcacgcggccgcgcaccgccagctgcgatacttctggccg
cgcgtcgtcggcgatatcggctggcagctattggacagcaagtttgccgtcgttgcccgc
gcggccggccgtgccaggctcaacgccagcagtgataacgtgcgcgacctggccggcgag
atcgagtgggccaaggcatcgctgatcacccccgagcaatacccggcggcggtggccgcc
gcatcccgagatactccgttggacgccgcgcagatcgcggccgtctacgccgaatacgag
tcgctcaaggtgcgcgatgagagcctcaccctgctcgatttcgacgatctgctgctgcat
accgcggccgccatcgaaaacgacgctgcggtggcccaggaattccgggaccggtaccgc
tgctttgtcgtcgacgaataccaggatgtcactccgctgcagcaacgagtcctgttggcc
tggttgggagatcgcgacgacctgacagtcgtcggtgatgccaaccagaccatctattcg
tttaccggggcatcgcctcgattcctgctcgacttttcccgccgatttcccgacgccacc
ctggtgcgtctggagcgcgactaccggtccactccgcaggtggtctcgttggccaaccgg
gtgatcgcggcggcccgcggccgggttgccggaagccggctgcagctgaccggccagcgc
gcgcccggcccggctccgtcgtttgatgaatatcccgacgaggtcgccgaagccaccgcg
gtggcggcgtcgatcgcccgactgatccaatccggaactcccgcatccgagatcgccatc
ctctaccgcgtcaatgcgcagtccgaggtctacgaagaagccttgaccgaggccggtatc
gcctaccaggtgcgtggcggcgagggattcttcaaccgccaagaggtcaagcaggcgatg
gtggccctgcagcgtgcggcggagcgcgatgtcgaggcagcgttgcccgacgtggtccgc
acggtcctggaacccctagggctgaccgccgaagaacccgccgggacccgggcccgggag
cgctgggaggcgctgagcgcattggcgcaactggtcgacgacgaggtggcgcagcgaccg
cacctgcagcttgccggattgctcgccgagcttcgagcgcgcgccgacgcacgccatcca
ccggtggtgcagggcgtcaccctcgcctcactgcacgcggccaagggtctggagtgggac
gcggtgttcctcgttggcttggccgacggcacgctgccgatctcgcacgcgttggcgcat
ggccccgagagcgaacaagtcgaagaggaacgccggctgctttatgtcggagtcaccagg
gcccgagtgcatttggcgctgacctgggcgctggcccggtccccgggcgggcgtcagggt
cgcaagccgtcgcgctttctcaacggcattgcgccgcagacgcgtgccgatccggggccg
gccaagaaccggcgcaaccgcggcccagtgcgctgccggatctgcaacaaggagctgacc
acgccggccgccctgatgctgcgccggtgcgaaacgtgtgccggcgacgtcaatgaggaa
ttgctgctgcagctcaagtcctggcggctcaacaccgccaaggaacagaacgtgcccgcc
tacgtcgtcttcaccgacaacacgctcatcgcgatcgccgagctgcttcccgccgatgat
gcatccctgatcgcgataccaggcattggcgcccgaaagctggagcagtacggggccgat
gtgctcgagctggtgcgccaagcacggtaa
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