Mycobacterium marinum E11: MMARE11_16470
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Entry
MMARE11_16470 CDS
T04774
Symbol
hupB
Name
(GenBank) DNA-binding protein Hu, HupB
KO
K03530
DNA-binding protein HU-beta
Organism
mmae
Mycobacterium marinum E11
Brite
KEGG Orthology (KO) [BR:
mmae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmae03032
]
MMARE11_16470 (hupB)
03036 Chromosome and associated proteins [BR:
mmae03036
]
MMARE11_16470 (hupB)
03400 DNA repair and recombination proteins [BR:
mmae03400
]
MMARE11_16470 (hupB)
DNA replication proteins [BR:
mmae03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
MMARE11_16470 (hupB)
Chromosome and associated proteins [BR:
mmae03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
MMARE11_16470 (hupB)
DNA repair and recombination proteins [BR:
mmae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
MMARE11_16470 (hupB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
CDM75795
LinkDB
All DBs
Position
1959814..1960476
Genome browser
AA seq
220 aa
AA seq
DB search
MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA
RNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVMASAAAKKAAKKAP
AKKAATKTAAKKAATKAPAKKAATKAPAKKAATKAPAKKAVTKVTKAPAKKVTKATVKKT
AAKAPVRKAATKAPAKKAAAKRPATKAPAKKATSTRRGRK
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagcagagctcattgacgtgctcacacagaaattgggctcggaccgtaggcag
gcaaccgcggccgtcgagaatgttgtcgacaccattgtgcgcgccgtgcacaagggcgac
agcgtcacgattaccggatttggggtgtttgaacagcgtcgccgtgcggcccgggtggcc
cgcaatccgcgtaccggtgagacggtgaaggtcaagccgacgtccgtcccggcatttcgc
ccaggcgcgcaattcaaagcggttgtctctggcgcacagcgtctcccggcggagggcccg
gcggtcaagcgtggcgtgatggcgagcgccgctgccaagaaggcagcaaagaaggctccc
gccaagaaggccgcgaccaagaccgctgccaagaaggccgcgaccaaggctcccgccaag
aaggccgcgaccaaggctcccgccaagaaggccgcgaccaaggctcccgccaagaaggcc
gtgaccaaggtcaccaaggctccggccaagaaggtgaccaaggcaacagtgaagaagact
gccgccaaggctccagtccgcaaggctgcgaccaaggcacccgccaagaaggctgcggca
aagaggccggccaccaaggctcccgccaagaaggcgacgagcacccggcgcggtcgcaag
taa
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integrated database retrieval system
