Mycobacterium marinum E11: MMARE11_17040
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Entry
MMARE11_17040 CDS
T04774
Symbol
fpg
Name
(GenBank) formamidopyrimidine-DNA glycosylase Fpg
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mmae
Mycobacterium marinum E11
Pathway
mmae03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mmae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MMARE11_17040 (fpg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmae03400
]
MMARE11_17040 (fpg)
Enzymes [BR:
mmae01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MMARE11_17040 (fpg)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MMARE11_17040 (fpg)
DNA repair and recombination proteins [BR:
mmae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MMARE11_17040 (fpg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
TackOD1
NFACT_N
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
CDM75852
LinkDB
All DBs
Position
2054757..2055635
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AA seq
292 aa
AA seq
DB search
MPELPEVEVVRRGLQDHVVGRTMTAVRVHHPRAVRRHEAGPADLTARLLGARITGTDRRG
KYLWLTLDSGSPTTGRDDPDTALVVHLGMSGQMLLGGVPRAEHVRISAVLDDGTVLSFAD
QRTFGGWLLADLVSVDGSVVPAPVAHLARDPLDPLFDADSVIKVLRGKHSEIKRQLLDQQ
VVSGIGNIYADEALWRAKVHGARVAATLTRRQLGAVLDAAADVMRAALAKGGTSFDSLYV
NVNGQSGYFDRSLDAYGREGENCRRCGAVMRREKFMNRSSSYCPRCQPRPRR
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagctgcccgaagtcgaggtggtgcggcgcggcctgcaggaccacgtggtgggc
aggacgatgaccgcggtgcgggtccaccacccccgtgcggtgcgccgccacgaagcaggg
ccggccgacttgacggcgcggctgctcggcgcgcgcatcaccggaaccgatcggcgcggc
aagtacctgtggttgacgctggactctgggtcgcccacgaccgggcgcgatgatccggac
accgcgctggtggtgcacctgggtatgagcgggcagatgttgctggggggtgttccacgc
gccgagcacgtgcggatctccgccgtgctcgatgacgggacggtgctgagctttgccgac
caacggaccttcggcgggtggctgcttgccgacctggtgagcgtcgacggcagcgtggta
ccggcgccggtcgcgcacctggcgcgtgacccgcttgacccgctattcgacgccgactcc
gtcattaaagtgttgcggggcaagcactctgagatcaaacgccaactcctcgaccagcag
gtggtgtcgggaatcggcaacatctacgccgatgaggcgctgtggcgggccaaggtgcac
ggcgcccgggtggccgccacgctgacccgtcggcaactgggcgcggttttggatgctgcc
gccgatgtgatgcgtgcggcgctggccaagggcgggacctcgtttgattcgctgtatgtg
aacgtcaacggtcagtcgggctacttcgaccgatcgctggacgcgtacggccgcgaagga
gaaaactgccggcgctgtggtgcggtgatgcgtcgggaaaagttcatgaaccgctcgtcg
tcctactgcccgagatgtcagccgcggccccgccggtag
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