Mycobacterium marinum E11: MMARE11_18530
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Entry
MMARE11_18530 CDS
T04774
Symbol
gpsI
Name
(GenBank) bifunctional protein polyribonucleotide nucleotidyltransferase GpsI
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mmae
Mycobacterium marinum E11
Pathway
mmae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MMARE11_18530 (gpsI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmae03019
]
MMARE11_18530 (gpsI)
03016 Transfer RNA biogenesis [BR:
mmae03016
]
MMARE11_18530 (gpsI)
Enzymes [BR:
mmae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MMARE11_18530 (gpsI)
Messenger RNA biogenesis [BR:
mmae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MMARE11_18530 (gpsI)
Transfer RNA biogenesis [BR:
mmae03016
]
Prokaryotic type
tRNA degradation factors
MMARE11_18530 (gpsI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
KH_NusA_1st
KH_PNO1_2nd
S1_RRP5
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
CDM76000
LinkDB
All DBs
Position
2221844..2224132
Genome browser
AA seq
762 aa
AA seq
DB search
MSVAETEEGVFEATATIDNGSFGTRTIRFETGRLAQQAAGSVVAYLDDENMLLSATTASK
NPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVNGLR
NEIQVVVTILSLDPNDLYDVVAINAASASTQLAGLPFSGPVGGVRVALIDGQWVAFPNVE
QLERAVFDMVVAGRIVGTEEDGTPDVAIMMVEAEATDKVIELVEGGAPAPTESVVAQGLE
AAKPFIAALCTAQQELADASGATAKTGAEYPVFPEYGDDVYYAVSSVATDGLAAALTIGG
KAERNQRTEEIKAEVLERLADTYEGREKEIGAAFRSLTKKLVRQRIVTDHFRIDGRGITD
IRALSAEVALVPRAHGSALFERGETQILGVTTLDMVKMAQQIDSLGPETTKRYMHHYNFP
PFSTGETGRVGSPKRREIGHGALAERALMPVLPSVEEFPYAIRQVSEALGSNGSTSMGSV
CASTLALLNAGVPLKAPVAGIAMGLVSDDVEVDGKTERRFVTLTDILGAEDAFGDMDFKV
AGTKDFVTALQLDTKLDGIPSQVLAGALAQAKDARLTILEVMAEAIDTPDEMSPYAPRVT
TIKVPVDKIGEVIGPKGKVINSITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIA
NPQLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVTVGDKLR
VEIADIDKRGKISLVLVAEDDDSAAAAAADSPAPADAATASS
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtagctgaaactgaagaaggcgtgttcgaagcaaccgccaccatcgacaacggg
agcttcggcacccgcaccatccgtttcgagactggccgattggcccagcaggccgccggc
tcggtggtcgcatacctcgacgacgagaacatgttgctgtcggcgaccaccgccagcaag
aaccccaaagagcatttcgacttctttccgctgaccgtcgatgtcgaagagcggatgtat
gccgccggccgcatccccggttcgttcttccgtcgtgagggccgcccctccaccgacgcg
atcctgacctgccggctcatcgaccgcccgctgcggccgtcgttcgtcaacggactgcgc
aacgagatccaggtcgtggtgacgattctgagcctggaccccaacgacctctacgacgtg
gtggcgatcaacgccgcgtcggcctccacccaactggccgggctgccgttctctggtccc
gtcgggggcgtgcgggtggccctcatcgacggccagtgggtcgcattccccaacgtcgag
cagctcgagcgcgccgtgttcgacatggtggttgccggccggattgtcggcaccgaggaa
gacggcacgcccgacgtcgcgatcatgatggtcgaggccgaggccaccgacaaggtcatc
gagctggttgagggtggcgccccggcgccgaccgagagcgtggtcgcgcagggtctggaa
gcggccaagccgttcatcgcggcgctgtgcaccgcgcagcaggagctggccgacgcatct
ggggccaccgccaagaccggtgccgaatatccggtgttccccgaatacggcgacgacgtc
tactacgcggtgtcctcggtggctaccgatggactggccgcggcgttgaccatcggtggt
aaggccgaacgaaaccagcgcaccgaggaaatcaaggccgaggtgctcgaacggctggcc
gacacctacgagggccgggaaaaagagatcggcgccgcgttccgctcgctgaccaagaag
ctggtacggcagcgcatcgtcaccgatcacttccgcatcgacggccgcggcatcaccgac
atccgcgcattgtcggccgaagtcgccctggttccgcgggcccacggcagcgcgctgttc
gagcgcggtgagacccagattctcggcgtgaccacgctggacatggtcaagatggcgcag
cagatcgactcgctggggccggagaccaccaagcggtacatgcaccactacaacttcccg
ccgttctccactggtgagaccggccgggtcggttcgcccaagcgacgggagatcgggcac
ggtgcgctggcggagcgggcgctgatgccggtgctgcccagcgttgaggaattcccgtac
gccattcgccaggtatccgaagcgctgggttccaacggctcgacctcgatggggtcggtg
tgcgcttcgacgctggcgctgctcaacgccggtgtgccgttgaaggcgccggtggccggt
atcgccatgggcctggtgtccgacgatgtcgaggtggacggcaagaccgagcgccgtttc
gtcaccttgaccgacatcctgggcgccgaagacgcgttcggtgacatggacttcaaggtc
gccggaaccaaggacttcgtcacggcactgcagctggacaccaagctcgacgggatcccg
tcgcaggttctggccggtgcgctggcccaggcgaaggatgcgcgcctgaccatcctcgag
gtcatggccgaggccattgacacgcccgacgagatgagcccgtacgcgcctcgggtgacc
accatcaaggttccggtggacaagatcggtgaggtgatcgggcccaagggcaaggtcatc
aactcgatcaccgaggagaccggcgcgcaaatctccatcgaggacgatggcaccgtgttc
gtcggcgccaccgacgggccgtcggctcaggctgccatcgacaagatcaacgccatcgcc
aacccacaactgcccaccgttggtgagcggttcctgggcacggtggtcaagacgaccgac
ttcggtgcgtttgtgtcgctgctgcccggtcgcgatggcctggtgcacatctccaagctg
ggcaagggcaagcgcatcgccaaggtcgaggacgtcgtcactgtcggcgacaagctgcgg
gtggagatcgccgacatcgacaagcgcggcaagatctcgctggtgttggtggccgaggac
gacgattcagccgctgcggcggccgccgattccccggcgccggccgatgccgccacggca
agtagctga
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integrated database retrieval system
