Mycobacterium marinum E11: MMARE11_18870
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Entry
MMARE11_18870 CDS
T04774
Name
(GenBank) conserved hypothetical hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mmae
Mycobacterium marinum E11
Pathway
mmae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MMARE11_18870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmae03019
]
MMARE11_18870
Messenger RNA biogenesis [BR:
mmae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MMARE11_18870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B_2
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
CDM76034
LinkDB
All DBs
Position
2258708..2260384
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AA seq
558 aa
AA seq
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MNEELPPPAPLASGGLRVTALGGINEIGRNMTVFEHLGRLLIIDCGVLFPTHDEPGVDLI
LPDLRHIEDRLDDIEALVLTHAHEDHIGAIPFLLRLRPDIPIVGSKFTLALVAAKCREYR
IKPVFVEVAEGQSSRHGVFECEYFAVNHSVPDALAIAVYTGAGTVLHTGDIKLDQLPLDG
RPTDLPGMSRLGDAGVDLFLCDSTNSEIPGVGPSESEVGPTLHRLIRGADGRVIVACFAS
NVDRVQQIIDAAVALGRRVSFVGRSMVRNMGIARELGFLRVDDSDVIDIGAAEMMPPEQV
LLITTGTQGEPMSALSRMSRGEHRSITLTAGDLIVLSSSLIPGNEEAVFGVIDSLSKIGA
RVVTNAQARVHVSGHAYAGELLFLYNGVRPRNVMPVHGTWRMLRANAKLAASAGVAPESI
LLAENGVSVDLVGRKASIAGAVPVGKMFVDGLITGDVGEITLGERLILSSGFIAVTVVVH
RGTGRPAAVPHLHSRGFSEDPKALEPAVRKVEAELESLVAANVTDPIRIAQGVRRTVGKW
VGETYRRQPMIVPTVIEV
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgaagaacttcccccaccagcgccgttggcttccggggggttgcgggtcaccgcg
ctgggcggcatcaacgaaatcggccgcaacatgacggtgttcgagcatctggggcggctg
ctgatcatcgactgcggcgtgctgttcccgacccacgacgagccgggcgtcgatttgatc
ctgcccgacctgcgccatatcgaggaccgcctggacgacatcgaggcgctggtgctcacg
cacgcgcacgaggaccacatcggggctatcccgttcttgctcaggttgcgtccggacatc
cccatcgtcggatccaagttcaccctggcgctggttgcggccaagtgccgcgaataccgg
atcaaaccggtgttcgtcgaggtcgcagaggggcagagcagtcgacacggcgtgttcgag
tgcgaatacttcgccgtcaaccactccgtgccggatgcccttgcgatcgccgtctacacc
ggcgcgggaaccgtgctgcacaccggtgatatcaagcttgatcagctgcccctcgacggt
cgccccaccgacttgccgggcatgtcgcgcctcggcgatgccggtgttgacctgttcctg
tgtgattcgaccaactccgagatccccggtgtcgggccctccgaaagtgaggtgggtccc
accctgcaccggctgatcaggggtgccgacggtcgggtcatcgtggcgtgtttcgcctca
aacgtcgaccgggtgcagcagatcatcgacgccgcggtggcactgggccggcgagtttcc
ttcgtggggcgctccatggtgcgcaacatgggcatcgccagggaactgggctttctgcgg
gtggacgattccgatgtgatcgacatcggtgccgccgagatgatgccgcccgaacaggtg
ttgttgattaccaccggcacccagggcgaaccgatgtcggcgttgtcgcggatgtcgcgc
ggtgagcaccgcagcatcacgctgactgccggtgatctcatcgttttgtcgtcgtcgctg
atccccggcaacgaggaagcggttttcggcgtcatcgattcgctctccaagatcggcgcc
agggtggtcaccaacgcccaagcccgggtgcacgtttccggccatgcctacgccggtgag
ctgttgttcctgtacaacggggtgcgaccacgcaacgtcatgccggtgcacggaacctgg
cgaatgcttcgggccaacgccaagctggccgccagcgccggggtggcgccggagtcaatc
ctgttggcggagaacggggtcagcgtcgatctggtggggcgcaaggcttcgatcgccggt
gccgtcccggttggcaagatgttcgtcgacggtttgatcaccggcgatgtcggcgaaatc
accctgggcgagcggctgatcctgtcgtcgggttttatcgcggtgaccgtggtcgtgcac
cggggcaccgggcgtcccgcggctgtgccgcatctgcattcgcgtggattctccgaagac
cccaaggcgctggagcccgccgtgcgcaaggtcgaagccgagctggaatctctggttgcc
gccaacgtcaccgatccgatcaggatcgcgcagggggtgcgccgcaccgtcggaaaatgg
gtcggtgagacctaccgccggcagccgatgatcgtgcccacggtcatcgaagtctga
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