Mycobacterium marinum E11: MMARE11_20140
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Entry
MMARE11_20140 CDS
T04774
Symbol
fadD11_1
Name
(GenBank) long-chain-fatty-acid-CoA ligase, FadD11_1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mmae
Mycobacterium marinum E11
Pathway
mmae00061
Fatty acid biosynthesis
mmae00071
Fatty acid degradation
mmae01100
Metabolic pathways
mmae01212
Fatty acid metabolism
mmae02024
Quorum sensing
mmae04146
Peroxisome
Module
mmae_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mmae00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
MMARE11_20140 (fadD11_1)
00071 Fatty acid degradation
MMARE11_20140 (fadD11_1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
MMARE11_20140 (fadD11_1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
MMARE11_20140 (fadD11_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mmae01004
]
MMARE11_20140 (fadD11_1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmae04147
]
MMARE11_20140 (fadD11_1)
Enzymes [BR:
mmae01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
MMARE11_20140 (fadD11_1)
Lipid biosynthesis proteins [BR:
mmae01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
MMARE11_20140 (fadD11_1)
Exosome [BR:
mmae04147
]
Exosomal proteins
Exosomal proteins of breast milk
MMARE11_20140 (fadD11_1)
Exosomal proteins of breast cancer cells
MMARE11_20140 (fadD11_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
sCache_3_2
Motif
Other DBs
NCBI-ProteinID:
CDM76161
LinkDB
All DBs
Position
complement(2387405..2389270)
Genome browser
AA seq
621 aa
AA seq
DB search
MHPTLAHEQPDIAKIDHRPPSVARMFLDRVAASPSAEAFRYPHGDDWESVTWEQVGERVG
RLAAGLISLGIAPQDRVALASSTRYEWVLVDFAVMCAGAATTTVYPTTIAADVAYIVANS
GSRVVVAEDQTQVDKLVEHRAELPEVARVVVIDGEGDGSWVITLAELEQLGKQLLADSPA
AVDQRVAAIGPDQLASLIYTSGTTGRPKGVRLTHGAWTYTASAIDALNVLGPADLNFLWL
PLAHAFGKVMLSLPLLIGFPTAIDGRVDRIVDNLAELHPTVMGAAPRIFEKAHARIEQMV
AEQGGLKKAVFDWSIGVGLKVSASRQAGRQPSLLSRLAYQLADRLVFSTIRERFGGRIRF
FVSAAAALDRNVAQWFDAIGITVLEGYGLTETAAASFINRPNAYRFGTVGWPFPATEAQI
ATDGEILLRGPGLMTSYHDLPEATEEALDHEGWFHTGDIGEIDADGYLRITDRKKDMFKT
SQGKYVAPAAIQVRFKGLCPYVGELIVVGEAKPYCVALVSLDSEAITEWAAGHGLVGKSF
AELTRDPKTRELIAGYIDTLNAELNRWEQIKKFAVLDRELSIESGDLTPSMKLRRKVVLD
KSADEISALYQQPTGPAPKTG
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgcatcccacgttggcccacgagcagcccgacatcgccaagatcgaccaccggccacca
tcggtggcgcggatgttcctagaccgcgtggccgcctccccgagcgccgaagcgttccgc
tatccccacggtgacgactgggagagcgtcacctgggagcaggttggcgagcgggtaggc
cgcttggcggccggcctgatctcgttgggcatcgccccgcaggatcgggtcgcgctggca
tcgtcgacccggtacgagtgggtgctcgtcgatttcgccgtgatgtgcgccggggcggcg
acaaccacggtgtatccgacgaccatcgccgccgacgtcgcctacatcgtggcgaactct
ggaagtcgagtcgtggtcgccgaggaccagacccaggtcgacaagctggtcgaacaccgc
gccgagctgcccgaggtggccagggtggtggtgatcgacggcgagggtgatggcagctgg
gtgatcacgctcgccgaactcgaacaactgggcaagcagctgcttgccgactcccccgcc
gccgtggaccagcgggtcgccgcgatcggccccgaccagctcgccagcctcatctacacc
tccggaaccaccggacggcccaagggtgtgcggttgacccacggggcttggacatacacc
gcctcggcgatcgatgccctcaacgtgctcggcccggccgacctgaactttctgtggctg
ccgctggcccacgcattcggcaaggtgatgctttcgctgccgctgctcatcgggttcccc
accgcgatcgacgggcgggtcgaccggatcgtcgacaatctggcggagctgcatcccacc
gtcatgggggcggcaccgcgcatcttcgaaaaggctcacgcccggatcgagcagatggtc
gccgagcagggcgggctcaagaaagcggtgttcgactggtcgatcggtgtgggattgaaa
gtctcggcctcccggcaagcgggccgccagccttcactgctgtccaggctggcctaccag
ctggccgaccggttggtgttctccaccattcgcgagcgcttcggcggccggatccgcttc
ttcgtctcggcggccgccgcactggaccgcaacgtcgcgcagtggttcgacgcgatcggt
atcaccgtgctcgaaggctacgggctgaccgagaccgccgcggcgtcttttatcaaccgc
cccaacgcctatcggttcggcacggtcggctggccgtttcccgctaccgaggcacagatc
gccacggatggcgagatcctgctgcgggggcctggcttgatgacgtcctaccacgacttg
cccgaggccaccgaggaggcgctcgaccacgaggggtggtttcacaccggcgacatcggg
gagatcgacgccgacggctacctgcggatcaccgaccgcaagaaggacatgttcaagacc
tcacaaggtaagtacgtcgcacctgccgcgatccaggtgaggttcaaaggtctgtgcccc
tacgtcggcgagctgatcgtcgtcggtgaagccaagccctattgcgtggccctggtcagt
ctggacagtgaagcgatcaccgagtgggccgcggggcatggattggtcggcaagtccttc
gcggagctaacccgcgaccccaagacacgcgagttgatcgcgggctacatcgacacactc
aacgccgagctcaaccggtgggagcagatcaagaaattcgccgtcctcgaccgcgagctg
tccatcgaatccggtgacctgacgccgagcatgaagctgcgccgcaaggtggttctggac
aagtccgccgacgagatctcggctctctaccagcaaccaacgggcccggcacccaagacc
ggctga
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