Mycobacterium marinum E11: MMARE11_22910
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Entry
MMARE11_22910 CDS
T04774
Symbol
dnaE1
Name
(GenBank) DNA polymerase III, alpha subunit, DnaE1
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mmae
Mycobacterium marinum E11
Pathway
mmae03030
DNA replication
mmae03430
Mismatch repair
mmae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MMARE11_22910 (dnaE1)
03430 Mismatch repair
MMARE11_22910 (dnaE1)
03440 Homologous recombination
MMARE11_22910 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmae03032
]
MMARE11_22910 (dnaE1)
03400 DNA repair and recombination proteins [BR:
mmae03400
]
MMARE11_22910 (dnaE1)
Enzymes [BR:
mmae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MMARE11_22910 (dnaE1)
DNA replication proteins [BR:
mmae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MMARE11_22910 (dnaE1)
DNA repair and recombination proteins [BR:
mmae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MMARE11_22910 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
CDM76438
LinkDB
All DBs
Position
2719813..2723355
Genome browser
AA seq
1180 aa
AA seq
DB search
MSGSSSRSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSA
TKAGVKPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNL
FKLSSLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAK
WREIFGADNYFLELMDHGLSIERRVRAGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEAL
LCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADVWT
PRDRMPIFPVPEGHDPASWLHHEVMAGLRRRFPSGLGQDYIDRAEYEIKVICDKGFPSYF
LIVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPD
IDIDFDDRRRGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRI
TKALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAG
VHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAI
ENIKANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIVA
VLALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFIA
QKVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGY
AFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPP
DVNESLVNFASVGQDIRFGLGAVRNVGANVVGSLIGTRSGKGKFTDFSDYLNKIDISACN
KKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGSDSGADAVF
TIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSNDAQV
RVGGILAAVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGADIADDAVVLVNAKV
AIRDDRISLIANELVVPDFSNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPGTSQVHL
RLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLGS
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgagcggttcttcttcgcggtcctttgtgcacctgcacaaccacaccgagtactcgatg
ctggatggtgcggcgaagatcacccccatgctggccgaggtggaacggctggacatgccc
gcgatcgggatgaccgaccacggaaacatgttcggcgccagcgagttctacaactcggca
accaaggccggggtgaagccgatcatcggcgtcgaggcgtatgtagctcccggctctcgt
ttcgatacccgtcgcatcacctggggtgatcccagccagaagggcgacgacgtatccggt
agcggctcttacacccacctgacgatggtggccgagaacgcgaccggcctgcgcaacctg
ttcaagctgtcgtcactggcctcgttcgagggtcagctcggtaagtggtcgcgcatggat
gccgaacttgtcgccgagcacgccgagggcatcatcgccaccaccggctgcccctccggt
gaggtgcagacccggctgcggctgggccatgaccgcgaagcgctggaatcggccgccaag
tggcgggagattttcggcgccgacaactacttcctcgagttgatggatcacggactgtcc
atcgaacgccgcgtccgtgcgggtctgatcgagataggccgcaagctcgacattccgccg
ctggccaccaacgactgccattacgtcactcgcgacgccgcgcacaaccacgaggcgctg
ctgtgtgttcagaccggcaagacgctctcggaccccaatcggttcaagttcgacggtgac
gggtactacctcaagtccgccgccgagatgcgccaactctgggacgacgacatcccgggc
gcctgcgactccaccctgctgatcgcggagcgagtgcagtcctatgccgacgtatggacc
ccgcgtgaccggatgccgatcttcccggtgcccgaggggcacgatccggcgtcgtggctg
catcacgaggtaatggccggcctgcggcgacgtttcccgtccggtctcggccaggactac
atcgatcgggctgagtacgagatcaaggtgatctgcgacaagggtttcccgtcgtacttc
ctgatcgtggccgacctgatcaactatgcgcggtcggtcgacattcgagtgggaccgggg
cgtggttcggcggccggatcgctggtggcctacgcgatgggcatcaccaacatcgacccg
ataccgcacggtctgctgtttgagcggttcctcaacccggagcgcccgtcagcgcccgat
atcgatatcgacttcgacgaccgccgtcgcggcgagatggtgcgctacgccgccgacaag
tggggccaggatcgagtcgcccaggtcatcaccttcggcaccattaagaccaaggcggcg
ctgaaggattccgcgcgtatccactacggccagcccgggtttgcgatcgccgaccgaatc
accaaggcgttgccgccgccgatcatggccaaggacattccgctgtccggcatcaccgac
ccggcccacgagcggttcaaggaggccgcggaggttcgtggcctcatcgagaccgacccc
gacgtccgcaccatctaccagaccgcgcgcgggctggaaggtctgatccgtaatgcgggc
gtgcacgcgtgtgcggtgatcatgagcagcgaacccttgacggaggccattccgctgtgg
aagcggcctcaagacggggccatcatcaccggctgggactacccgtcgtgtgaggcgatc
ggcctgttgaagatggacttcttgggcctgcgaaacctgacgatcatcggcgacgcgatc
gagaacatcaaggcaaaccggggaatcgacctcgacctggaatcgctgccgctcgacgac
aagcccacctacgagctgttgggacgcggtgagacgctgggcgttttccagctcgacggc
gggccgatgcgcgacctgctgcgtcgcatgcaacccaccgagttcaatgacatcgtcgcc
gtcctggcgctgtaccggccaggcccgatgggcatgaacgcccacaacgactatgccgac
cggaagaacaatcgccaagcggtcaagccgattcaccccgagctggaggagccgctgcgc
gaaatcctctcggagacctacggtctgatcgtctatcaagagcagatcatgttcatcgcc
caaaaggtcgcctcctacacgatgggtaaggccgacgcgctgcgcaaggcgatgggcaag
aagaagctcgaggtgctcgaggcggaatacaagggcttctacgaaggcatgaccgccaac
ggattctccgaaaaagcggtcaaggcgctgtgggacaccatcctgccgttcgccggatac
gccttcaacaagtcgcacgccgcgggctacggtctggtctcgtattggaccgcctatctg
aaggccaactacccggccgagtacatggccgggttgctgacctcggtcggtgacgacaag
gacaaggccgcggtctacctggccgattgccgcaagctgggcatcaccgtgctaccgccc
gatgtcaacgagtcattggtgaacttcgcctcggtcgggcaggacatccgcttcgggttg
ggtgcggtgcgcaatgtcggggccaacgtcgtcggttcgttgatcggtacccgcagcggc
aaaggcaaattcaccgacttctccgactacctgaacaagatcgacatctcggcctgcaac
aagaaagtcaccgagtcgctgatcaaggcgggggcgttcgactcgctcgggcacccgcgc
aaaggcctcttcctggtgcacaccgacgccgtggactcggtgctgggtaccaagaaggcc
gaggcgatgggacagttcgatctcttcggcggcagcgactcgggtgccgacgcggtgttc
accatcaaggttcccgaggacgagtgggaagacaaacacaaactcgcactggaacgcgag
atgctgggcctgtacgtgtcggggcatccactcaacggggtggcacatctgttggccgcc
caggttgataccgcgatcccggcaatcctggatggtgatgtctccaacgatgctcaggtg
cgggtgggcggcatcctggcggccgtgaaccggcgggtcaacaagaacgggatgccctgg
gcatcagctcaattggaagatctcaccggtggtatcgaggtgatgttcttcccgcacacc
tactccaactatggcgccgatatcgccgacgacgccgtggtgctggtcaacgccaaggtc
gcgattcgcgacgaccgcatcagcttgatcgccaacgagctcgtggtgcccgatttttcc
aatgcccaggcggatcggccgctggccgtgagcctgcccacccggcagtgcaccatcgat
aaggtcaccgcactcaaacaggtgctggctcggcacccgggtacgtctcaggtgcatctg
cggctgatcagtggggatcggatcaccacgctggagctcgaccagtcactacgggtcacg
ccatcgccggcgttgatgggcgatctgaaagagctgctcggtcccggctgcctgggcagc
tga
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integrated database retrieval system
