Mycobacterium marinum E11: MMARE11_23550
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Entry
MMARE11_23550 CDS
T04774
Symbol
polA
Name
(GenBank) DNA polymerase I PolA
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mmae
Mycobacterium marinum E11
Pathway
mmae03030
DNA replication
mmae03410
Base excision repair
mmae03420
Nucleotide excision repair
mmae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MMARE11_23550 (polA)
03410 Base excision repair
MMARE11_23550 (polA)
03420 Nucleotide excision repair
MMARE11_23550 (polA)
03440 Homologous recombination
MMARE11_23550 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmae03032
]
MMARE11_23550 (polA)
03400 DNA repair and recombination proteins [BR:
mmae03400
]
MMARE11_23550 (polA)
Enzymes [BR:
mmae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MMARE11_23550 (polA)
DNA replication proteins [BR:
mmae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MMARE11_23550 (polA)
DNA repair and recombination proteins [BR:
mmae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MMARE11_23550 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MMARE11_23550 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
DNA_pol_lambd_f
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
CDM76502
LinkDB
All DBs
Position
2796879..2799578
Genome browser
AA seq
899 aa
AA seq
DB search
MSVATEQSTKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEA
PTHIAAAFDVSRQTFRSERYPEYKANRSSTPDEFHGQIDITKEVLNALGITVLAAPGFEA
DDIIATLATQAEGEGYRVLVVTGDRDSLQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYG
LTPVQYPDFAALRGDPSDNLPGIPGVGEKTASKWIVEYGSLQGLVDQVDSVRGKVGDSLR
ANLASVVRNRELTDLVRDVPLAQTPEALRLQPWDRDQIHRLFDDLEFRVLRDRLFDTLAA
VEPEVDQGFDVRGGAVSPGAVAQWLAEHVVDGRRCGLTVVGTHLPHGGDATALALAAADG
EGGYIDTATLTPDDDAALGEWLADPAKPKALHEAKLAIHDLRGRGWTLNGVTSDTALAAY
LVRPGQRSFTLDDLSLRYLRRELRAETPEQQQLSLLDDDDTDVAAAQTAILRARAVIDLA
DALDAELDRIDSTGLLADMELPVQHVLAEMETAGIAVDLTMLGGLQSQFADQIRDAAEAA
YAVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLA
HRDVTRLKVTVDGLLNSVADDGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRQIRD
AFVVGDGYSELMTADYSQIEMRIMAHLSRDEGLIEAFNTGEDLHSFVASRAFGVPIEEVT
GELRRRVKAMSYGLAYGLSAYGLSSQLKISTEDAKVQMDQYFSRFGGVRDYLMAVVEQAR
KDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIEVDKALKEH
ALKSRMLLQVHDELLFEVAAGEREQIEALVRDKMGSAYPLDVPLEVSVGFGRSWDSAAH
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgtcgcgaccgagcaatccacaaagccgacgctgatgttgctagacggcaattcg
ctagcctttcgcgcgttctatgcgctgcccgcggagaacttcaagacccgcggcgggcta
accaccaatgccgtctacggcttcaccgccatgttgatcaatctcctgcgcgacgaagcg
cccacgcatatcgcggcggcatttgacgtctcacggcagactttccgctccgagcgctat
ccggagtacaaggccaatcgaagctcgacccccgacgagttccacggtcagatcgacatc
accaaggaagttctcaacgcgctggggatcacggtgctggccgcaccgggatttgaggcc
gacgacatcatcgcgacgttggccacccaggctgaaggggaggggtaccgggtgctggtc
gtcaccggcgaccgagactccctgcaactggtcagcgatgacgtgaccgtgctctacccg
cgcaagggcgtcagcgaactcacccgcttcaccccggaggccgtcgtggagaagtacggg
ctcaccccagtgcagtatcccgacttcgccgccttgcgcggtgatcccagcgacaacctg
cccggcattcccggagtgggggagaagaccgcgtccaagtggattgtcgaatacggttcg
ttgcaggggctggtcgaccaggttgactcggtgcgcggcaaggttggcgactcgctgcgg
gcgaatctggccagcgtggtgcgcaaccgggaactcactgatctggtgcgcgacgtgccg
ttggcgcagaccccagaggccttgcggctgcagccctgggaccgcgaccagattcaccgg
ctgttcgacgacctcgagttccgggtgttgcgcgaccggctcttcgatacgctggccgcc
gtcgaacccgaggtcgaccagggatttgacgttcgcggaggtgcggtgtcgcccggcgca
gtggcgcagtggctggccgagcatgtcgtggacgggcgtcgctgcggcctgacggtcgtg
ggtacccatctgccccatggtggcgacgccaccgcactggccctcgccgccgccgacggc
gagggcggctacatcgacaccgcgacgctgacccccgatgacgacgcggcgctgggtgag
tggctggccgaccctgccaaacccaaggcactgcatgaggcgaagctggctatccacgat
ctgcggggccgaggctggacgctcaacggtgtcacttccgacaccgcgctggccgcctat
ctggttcgtccgggccagcgcagcttcactctcgacgacctctcactgcgctacctacgt
cgcgaattgcgggcagaaacacctgagcagcagcaactttcgctgctcgatgacgacgac
accgacgtcgcggccgcccagactgcaatcctgcgggcgcgcgccgtcatagacctcgcc
gatgcgctggatgccgagctggacaggatcgactccaccgggttgctggccgacatggag
ttgccggtgcaacacgtgctcgcggaaatggaaacggccggcatcgcggtcgatctgacg
atgctcggcgggctgcaaagccagttcgctgaccagatccgcgatgccgctgaggccgcc
tacgccgtgatcggcaagcagatcaacctgggctcacccaagcaactgcaggtcgtgctg
ttcgacgagctgggaatgccgaagaccaagcggaccaagaccggttacaccaccgacgcg
gacgcgctgcagtcgttgttcgacaagaccggacatccttttctgcagcatttgttggcg
caccgcgatgtcacccgcctgaaggtgaccgtggacgggttgttgaactcggtcgccgac
gacggccggattcacaccaccttcaatcagaccatcgccgcaacgggccggttgtcgtcg
acggagcccaacctgcagaacatcccgatccgtaccgacgccggccgccagatccgcgac
gctttcgtggtcggcgacggatacagcgagctgatgaccgccgactatagccagatcgag
atgcggatcatggctcatctgtcgcgcgatgagggtcttatcgaagccttcaacaccggc
gaggatctgcactcgtttgtggcctcgagggccttcggcgtgcccatcgaggaagtaacc
ggtgaattgcgccgccgggtgaaggcgatgtcctacgggttggcctacgggctgagcgcc
tacgggctgtccagccagctcaagatctccaccgaggacgccaaggtccagatggatcag
tacttctctcgattcggtggggtgcgcgactacctgatggccgtcgtcgaacaggcccgc
aaagacggctacacctccacggtgttggggcgtcggcgctaccttcccgagctggacagc
agtaatcgacaggtacgggaggcagcggagcgcgccgcgctcaacgcaccgatccagggc
agcgccgccgacatcatcaaggtggcgatgatcgaggtcgacaaggcgctgaaagaacac
gccctcaagtcgcgcatgttgttgcaggtacacgacgaattgctattcgaagtagcggcc
ggcgagcgcgaacagatcgaggcactggtacgcgacaagatgggcagcgcctatccgctc
gatgtgcccctggaggtgtcggtcggcttcggccgcagctgggactcggccgcgcactga
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