Mycobacterium marinum E11: MMARE11_24900
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Entry
MMARE11_24900 CDS
T04774
Symbol
gabD2
Name
(GenBank) succinate-semialdehyde dehydrogenase [NADP+] dependent (SsdH) GabD2
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
mmae
Mycobacterium marinum E11
Pathway
mmae00250
Alanine, aspartate and glutamate metabolism
mmae00310
Lysine degradation
mmae00350
Tyrosine metabolism
mmae00650
Butanoate metabolism
mmae00760
Nicotinate and nicotinamide metabolism
mmae01100
Metabolic pathways
mmae01120
Microbial metabolism in diverse environments
Module
mmae_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
mmae00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
MMARE11_24900 (gabD2)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
MMARE11_24900 (gabD2)
00310 Lysine degradation
MMARE11_24900 (gabD2)
00350 Tyrosine metabolism
MMARE11_24900 (gabD2)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
MMARE11_24900 (gabD2)
Enzymes [BR:
mmae01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
MMARE11_24900 (gabD2)
1.2.1.20 glutarate-semialdehyde dehydrogenase
MMARE11_24900 (gabD2)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
MMARE11_24900 (gabD2)
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Motif
Pfam:
Aldedh
LuxC
OmdA
Motif
Other DBs
NCBI-ProteinID:
CDM76637
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All DBs
Position
2981535..2983091
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AA seq
518 aa
AA seq
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MPVPSSAVFERLLGLAAIKDVDARPTRTIDEVFTGKPLTTIPVGTAEDVEAAFAEARAAQ
ANWAKRPVSERAEVIRRYRDLVIENREFLMDLLQAEAGKARWAAQEEVVDLVANANYYAR
VSAGLLKPRTVQALLPGIGKTTVGYQPKGVVGVISPWNYPMTLTASDSVPALIAGNAVVL
KPDSQTPYCALACAELLYRAGLPRALYAVVPGPGSVVGTAIADNCDYLMFTGSSATGGRL
AEHAGRRLIGFSAELGGKNAMIVTRGVNLDKVAKAATRACFSNAGQLCISIERIYVEKDI
ADEFTRKFGDAVRGMKLGTAYDFSVDMGSLISEGQLKTVSGHVDDATAKGAKVIAGGKAR
PDVGPLFYEPTVLTDVTHEMECADNETFGPLVSIYPVADVEEAVERANDTEYGLNASVWA
GSTAEGEKIASRLRSGTVNVNEGYAFAWGSLSAPMGGMGISGVGRRHGPEGLLKYTESQT
IATARVFNLDPPMGVPPTLWQKSLLPIVRTVMKLPGRK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttccgtcatccgcggtcttcgagcgtctactgggccttgccgcgatcaaggac
gtcgatgctcgtccgacccggaccatcgacgaggtctttactggcaaaccgttgaccacc
atcccggtcggcaccgccgaagacgtcgaggcagcgtttgccgaagctcgcgcggcacaa
gccaactgggcgaagcgtccggtcagcgaacgcgcggaggtcatccgccgctaccgcgac
ctggtcatcgagaaccgcgagtttctgatggacctgctgcaggccgaggcgggcaaggcg
cgctgggcggcgcaggaggaagtcgtcgacctggtagccaacgccaactactacgcacgc
gtgtccgcgggcctgctgaagccccgcacggtacaggcgctgctgcccgggatcggcaag
accacggtcggctaccagcccaaaggcgtggtcggggtgatttcgccatggaattacccc
atgacgctcacggcgtcggactcggttcccgcgctgatcgcgggtaatgcggtggtgctc
aagccggacagccagacgccgtactgcgcactggcgtgcgccgagctgctgtaccgggcc
ggcctgccgcgcgcgttgtatgcggttgtgccggggccgggctcggtggtgggtaccgcg
atcgccgataactgcgactacctgatgttcaccggttcgtcggcgacgggcggccggctt
gccgagcacgccggccgtcggctcatcggtttctcggccgaactcggcggcaagaacgcg
atgatcgtgacgcgcggcgtcaacctcgacaaggtggccaaggcggccacccgcgcctgc
ttctccaacgcgggccaattgtgcatctccatcgagcggatctacgtcgagaaagacatc
gccgacgagttcacccgcaagttcggcgatgcggtgcgaggcatgaagctcggtaccgcc
tacgacttctcggtcgacatgggcagcttgatctccgagggacagctcaagaccgtgtcc
ggccacgtggatgacgcaacggccaagggcgccaaggtgattgcgggcggcaaggctcga
cccgatgtcgggccgctgttctacgagccgaccgtgctgaccgatgtcacccacgaaatg
gaatgcgcggacaacgaaacgtttgggccgctcgtctcgatctacccggttgccgacgtc
gaggaggccgttgagagggccaacgacaccgaatacgggctcaacgccagcgtatgggcg
ggctcgaccgccgagggggagaagatcgcctcccggttgcggtcgggaacggtgaacgtc
aacgagggctatgccttcgcctggggaagcctgagcgcaccgatgggcggcatggggatc
tccggggtcggccgcaggcacggtcccgaggggctgctcaagtacaccgaatcgcagacg
atcgccaccgctcgcgtattcaacctcgatccgccgatgggtgtcccgcccaccctctgg
cagaagtcgctcttgccgatcgtgcgcacggtgatgaagctgcccgggcggaagtga
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