Mycobacterium marinum E11: MMARE11_30000
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Entry
MMARE11_30000 CDS
T04774
Symbol
helY
Name
(GenBank) ATP-dependent DNA helicase HelY
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
mmae
Mycobacterium marinum E11
Brite
KEGG Orthology (KO) [BR:
mmae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmae03019
]
MMARE11_30000 (helY)
Enzymes [BR:
mmae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MMARE11_30000 (helY)
Messenger RNA biogenesis [BR:
mmae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MMARE11_30000 (helY)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
HEAT_EF3_GNC1
AAA_30
ANAPC1
Motif
Other DBs
NCBI-ProteinID:
CDM77144
LinkDB
All DBs
Position
complement(3585894..3588650)
Genome browser
AA seq
918 aa
AA seq
DB search
MTELVELARFTADLPFALDDFQRRACAALEGGHGVLVCAPTGAGKTVVGEFAVHLALASG
GKCFYTTPLKALSNQKHTDLTARYGRDKIGLLTGDLAVNANAPVVVMTTEVLRNMLYADS
PALPGLSYVVMDEVHFLADRMRGPVWEEVILHLPEEVRVVSLSATVSNAEEFGGWIQAVR
GDTTVVVDEHRPVPLWQHVLVGKRLFDLFDYQADKPAGSSRQARVNPDLLRHIAHRRETD
RMSDWEPRRSGRGGYGRGGRPRFYRPPPRPDVIATLDSAGLLPAITFVFSRAGCDAAVQQ
CLRSPLRLTSEEERAQIAEVIDHRCGDLEDDDLAVLGYYEWREGLLRGLAAHHAGMLPAF
RHTVEELFTAGLVKAVFATETLALGINMPARTVVLERLVKFNGEQHVPLTPGEYTQLTGR
AGRRGIDVEGHAVVLWHPTDENADPSAVAGLASTRTFPLRSSFAPSYNMTINLVQHMGPE
QAHRLLEQSFAQYQADRSVVGLVRGIERGKEMLDELAAELGGPDAPILDYARMRARVTEM
ERSQARASRLQRRQEASEALAALRKGDIITITHGRRGGLAVVLESARDSSDPRPLVLTEN
RWAGRISSADYTGESPPVGSMTLPKRVEHRQPRVRRDLASALRSAAAGMTAPAARREKTR
APHDPDLASLREKLRRHPCHNAPGVESQIRQAERYLRIERDNAQLENKVAAATNSLARTF
DRIVGLLTEREYIHGPADDPRVTDDGRLLARIYSESDLLVAECLRTGAWAGLKPPELAAV
VSCVLYETRGSDGGGGRPGVEAPTPRLRQALIQTSRLSVALRADEQAHRIGQSREPDDGF
VNVVYRWARTGDLSAALAAADIEGPGSPLSAGDFVRWCRQVLDLLDQVRNAAPDPEVRAA
AKRAINDIRRGVVAVDAG
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
gtgacagagctggtcgagctagcccggttcaccgccgacttacccttcgcgctcgatgac
ttccaacggcgcgcctgtgctgccctggaaggtgggcacggcgtgctggtgtgcgccccg
acgggcgcgggaaagacggtggtcggcgaattcgcggtgcacctggcgctggcttcgggc
ggcaagtgcttttacaccacgccgctcaaggcgctgagcaaccagaaacacaccgatctg
acggcgcgctacggccgcgacaagatcgggttgttgaccggtgatctggcggtcaacgca
aacgcgcccgtggtcgtgatgaccaccgaggtgctgcgcaacatgctttacgcggattct
cccgcgctaccggggctgtcgtacgtggtgatggacgaggtgcattttctcgccgaccgg
atgaggggcccggtgtgggaggaggtgatcctgcatctgcccgaagaggtgcgggtggtc
agtctgtccgcgaccgtgagcaacgccgaggagttcggcggctggatccaagccgtccgg
ggcgacacgaccgtggtggtcgacgagcatcggccggtaccgctgtggcagcacgtcttg
gtgggcaagcgcctgttcgacctgttcgactaccaggccgacaaaccggcgggttcgagt
cgtcaggcgcgcgtcaacccggacctgttgcgccacatcgcgcatcgccgcgagacggat
cggatgtcggactgggagccgcgtcggtctggacgcggcggatacggcagagggggccgg
ccgcgcttttaccgcccgccgccccgcccggacgtcatcgcgaccctggattcggcgggt
ctgttgccggcgatcaccttcgtgttctcccgggctggttgtgatgcggcggtccagcag
tgcctgcgttcaccgctgcggttgaccagcgaggaggaacgcgcccaaatcgccgaggtg
atcgatcaccggtgcggcgatctggaggacgacgacctggcggtactgggctactacgag
tggcgcgaggggctgctgcgcggcctggccgcccaccatgccgggatgctgccggcgttt
cggcacaccgttgaggaactgttcaccgccggcttggtcaaagccgttttcgccaccgag
accttggcgctgggcatcaatatgcccgcgcgcaccgtggtgctggaacggttggtgaag
ttcaacggtgagcagcacgtcccgctgacgccgggggagtacacgcagctgaccgggcgc
gccggtcgtcgcggtatcgatgtcgagggccacgccgtcgtgctctggcatcccaccgac
gaaaacgccgatccgtcggcggtggccgggctggcctcgacccgcaccttcccgctgcgc
agttcgtttgccccgtcgtacaacatgacgatcaacctggtgcagcacatgggcccggag
caggcgcatcggctgttggaacaatcgttcgcccagtaccaggccgaccgatccgtggtg
ggcctggtccgcggcattgagcggggcaaggagatgctcgacgagctggccgccgagctc
ggtgggcccgacgcgccgatcctggactatgcccggatgcgtgcgcgggtgaccgagatg
gagcgatcccaggcccgtgcatcccggctgcagcgtcggcaggaggccagcgaagcgctg
gccgcgctgcgcaagggagacatcatcaccatcacgcacggacgccgtggtgggctggca
gtggtgctggaatccgcccgcgacagctccgacccgaggccgttggtgctgaccgaaaac
cggtgggctgggcggatttcgtcggccgactacaccggcgagtcgccgccggtcggatcg
atgacactgcccaagcgtgtcgaacatcgccagccgcgggtccgccgcgatctggcctcg
gcactgcggtcggccgccgcgggtatgacggcgccggcggcccgccgcgagaagacgcga
gcgccgcacgatcccgatctggcgtcgctccgcgaaaaactgcgccggcatccctgccac
aacgcgcccggagtcgaaagccagatccgtcaagccgagcgttacctgcgcatcgaacgg
gacaacgcgcagctggagaacaaggtcgccgccgccaccaattcgttggctcgcacgttc
gaccggatcgtcggcctgctcaccgagcgtgagtacatccacggcccagccgatgatcct
cgggtcaccgatgatggccgcttgttggcgcggatctacagcgagagtgatctgttggtg
gccgagtgcttgcgcaccggcgcgtgggcggggttgaagccgccggagctggcggcggtg
gtgtcctgcgtgctctacgaaacgcgcggcagtgacggtggcggtggccgtcccggggtc
gaggcgccgacgccgcggttgcgtcaggcgctcatccagacgtcgcggctgtcggtggcg
ctgcgtgccgacgaacaagcgcaccggatcggccaaagccgcgaacccgacgatggcttt
gtcaacgtcgtttatcgctgggcgcgcaccggggacctgtcggcggcattggccgccgcg
gacatcgagggccccggttctcccttgtcagcgggggatttcgtgcgctggtgccgccag
gtgctcgacctgcttgaccaggtgcgcaacgccgccccggaccccgaagtgcgggccgcc
gcaaagcgcgcgatcaatgacatccggcgcggcgtcgtcgcagttgacgccgggtag
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