Mycobacterium marinum E11: MMARE11_36410
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Entry
MMARE11_36410 CDS
T04774
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit HolA
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
mmae
Mycobacterium marinum E11
Pathway
mmae03030
DNA replication
mmae03430
Mismatch repair
mmae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MMARE11_36410 (holA)
03430 Mismatch repair
MMARE11_36410 (holA)
03440 Homologous recombination
MMARE11_36410 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmae03032
]
MMARE11_36410 (holA)
03400 DNA repair and recombination proteins [BR:
mmae03400
]
MMARE11_36410 (holA)
Enzymes [BR:
mmae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MMARE11_36410 (holA)
DNA replication proteins [BR:
mmae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MMARE11_36410 (holA)
DNA repair and recombination proteins [BR:
mmae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MMARE11_36410 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
DNA_pol3_delta
AA_kinase
B12-binding_2
Motif
Other DBs
NCBI-ProteinID:
CDM77778
LinkDB
All DBs
Position
complement(4426628..4427605)
Genome browser
AA seq
325 aa
AA seq
DB search
MSEISPLHLVLGDEELLVERAVGDIVRAARERARQAAGTDDVPVNRMRAGDVSTYELAEL
LSPSLFAEERIVVLEAAAEAGKDAVALIASTAADIPPGTVLVVVHSGGGRAKALAGELKS
LGAQVHPCARISKASERVDFVRGEFRALRVKVGEDTVTALLDAVGSDIRELASACSQLVA
DTGGDVDAVAVRRYHSGKAEVKGFDIADKAVAGDVAGATEALRWAMMRGEPLVVLADALA
EAIHTIGRVGPLSGDPYRMASQLGMPPWRVQKAQKQARRWSRDKVATAMQLVAQLNADVK
GAAADADYALESAVRTVAELVADRA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgagatttcgccgttgcacttggtcctgggtgatgaggaattgttggtcgagcgg
gcggtgggcgacatcgtgcgggcagcgcgtgagcgggcacgccaggctgcgggcaccgac
gacgtgccggtcaaccgaatgcgcgcgggcgacgtcagcacctacgagctggccgaactg
ctgagcccctcgctgttcgccgaggagcggatagtcgttttggaggccgctgccgaggcc
ggcaaagacgcggtcgcgttgatcgcctcgaccgccgccgacattccaccgggcacggtg
ctggtggtggtgcattccggcggtgggcgggccaaggcgctcgccggtgagctgaagtcg
ctgggtgcacaggtgcacccgtgtgcgcggatcagcaaggccagcgagcgtgtcgacttt
gtccgtggcgagttccgcgcgctgcgggtcaaggtcggcgaggacactgtgacggccctg
ctcgatgccgtcggatccgatatccgcgaactggcctcggcctgctcacagctggttgcc
gacaccggcggagatgttgatgccgtcgcggtccgtcgctatcacagcggcaaggccgag
gtgaaaggttttgatatcgccgacaaggcggtggccggcgacgtggccggcgccaccgag
gcgctgcgctgggcgatgatgcgcggagaaccgctggtggtactggccgatgccctggcc
gaagccatacacacgatcggtcgggtggggccgttgtcgggagacccgtaccgcatggca
agccagctgggcatgccgccgtggcgggtgcaaaaggcccagaaacaagcgcggcgctgg
tcgcgcgacaaggtcgcaacggcgatgcagttggtcgcgcaactcaacgccgacgtcaag
ggagccgcggccgacgctgactacgcgctggaatccgcggtcagaacggtggccgagttg
gtcgccgaccgggcctga
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