Mycobacterium marinum E11: MMARE11_53000
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Entry
MMARE11_53000 CDS
T04774
Symbol
pcnA
Name
(GenBank) poly(a) polymerase PcnA
KO
K00974
tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:
2.7.7.72
3.1.3.- 3.1.4.-]
Organism
mmae
Mycobacterium marinum E11
Pathway
mmae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MMARE11_53000 (pcnA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmae03016
]
MMARE11_53000 (pcnA)
Enzymes [BR:
mmae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.72 CCA tRNA nucleotidyltransferase
MMARE11_53000 (pcnA)
Transfer RNA biogenesis [BR:
mmae03016
]
Eukaryotic type
3'processing and CCA adding factors
CCA adding factors
MMARE11_53000 (pcnA)
Prokaryotic type
MMARE11_53000 (pcnA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
CDM79486
LinkDB
All DBs
Position
complement(6316287..6317732)
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AA seq
481 aa
AA seq
DB search
MPETVQDADLLTAAAVALNRHAAVLGELGSAFADAGHDLYLVGGSVRDALLGRLKSPDLD
FTTDARPQQILKIVRPWADAVWDTGIEFGTIGIAKNDYRLEITTFRADSYDQVSRHPEVR
FGERLEDDLVRRDFTVNAMAVRITASGPGEFLDPLSGLSVLRDKVLDTPAAPSVSFGDDP
LRMLRAARFVSQLGFAVAPRVRDAIEEMAPQLARISAERVAAELDKLLLGENPVAGIDLM
VHTGMGEVVLPEIGGMQMAIDEHHQHKDVYQHSLTVLRQAIELEDDGPDLVLRWAALLHD
IGKPTTRRHEANGGVSFHHHEVVGAKMVRKRMRALKYSKQMVDDVSQLVYLHLRFHGYGD
GKWTDSAVRRYVTDAGPLLARLHKLVRADCTTRNKRRAARLQASYDRLEERITELAAQED
LDRVRPDLDGNQIMTLLDIPAGPQVGEAWRYLKELRLERGPLTIEEAKAELLSWWQSRGN
P
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgaaaccgtccaggatgccgacctgctgaccgccgccgcggtagccctcaatcgg
cacgccgccgtgcttggtgaactcggatcggcgttcgccgatgcgggtcacgacttgtat
ctggtcggtggttcggttcgggatgccctgctgggccggttgaagtcccccgacctggac
ttcaccaccgacgcccgcccgcaacagatactgaagatcgtgcgcccctgggccgatgcc
gtgtgggacacgggcatcgaattcgggacgattggcatcgccaagaacgactaccgcctg
gagatcacgaccttccgggccgacagctacgaccaggtttcgcggcaccccgaggtccgt
ttcggcgagcgcctcgaagacgacctggtgcgccgcgatttcaccgtgaatgcgatggcc
gtgcggatcacggccagtggcccgggcgagttcctcgatccgttgagcggtttgtcggtg
ctgcgcgacaaggtgctcgacacgccggccgcgccttcggtgtccttcggtgacgacccg
ctgcgaatgctgcgagccgcgaggttcgtctcccagctcggcttcgccgtggcaccgcgg
gtgcgggacgcgatcgaagaaatggccccgcaattggcacgcatcagcgccgaacgggtc
gccgctgagctggacaagctactgctgggcgagaatccggtggccggcatcgacctgatg
gtgcacaccggaatgggcgaggtggtgctccccgagatcggtggcatgcagatggccatc
gacgaacaccaccagcacaaggacgtctaccagcactcgctgaccgtgctgcgccaagcg
atcgaactggaagacgacggaccggacctggtgctgcggtgggcggcgctgctgcatgac
atcggcaagccgaccacccgacgccacgaggccaacggcggtgtgagtttccaccaccac
gaggtggtgggcgccaagatggtgcgcaaacggatgcgcgccctcaagtactccaagcag
atggtcgacgacgtctcgcagctggtgtatctgcatctgcgattccacggctacggcgat
gggaagtggacggactcggcggtgcggcgctatgtcaccgatgcgggaccgctgctggcg
cgactacacaagctggtgcgcgccgactgcaccacgcgcaacaagcgtcgggccgcgcgg
ctgcaagccagctatgaccggctcgaggagcggatcaccgaactggccgcccaggaggac
ctggaccgggtgcgacccgatctggatggcaaccagatcatgacgctgctcgacattccg
gccggccctcaagtcggtgaggcgtggcgctatctcaaagagctgcggctcgagcgtgga
ccgttgaccatcgaggaagccaaggccgaactgctgtcctggtggcaatcgcgggggaac
ccctag
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