Methylophaga marina: GCM100_01040
Help
Entry
GCM100_01040 CDS
T09183
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mmaf
Methylophaga marina
Brite
KEGG Orthology (KO) [BR:
mmaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmaf03400
]
GCM100_01040
Enzymes [BR:
mmaf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
GCM100_01040
DNA repair and recombination proteins [BR:
mmaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
GCM100_01040
Prokaryotic type
GCM100_01040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BDZ72385
LinkDB
All DBs
Position
complement(98356..99855)
Genome browser
AA seq
499 aa
AA seq
DB search
MNIVWFKRDLRIQDHGALTLAAEQGPILPVYVFEAELWQQGDMSRRQYLFLKECLYELNQ
VLTARGCPLIVRVGEAVNVFESLRQQYAITDVWSHQETWNGWTYQRDIAVQTWADHHHVN
WHQPRQHGVIRRLKDRDGWARRWYQHMNQACYVCPDKLSGPSEKNDYLPSPDKLGLSDDG
CSQRQKGGREQGLRLLDTFLHQRGQGYTKEMSSPLTAVDSCSRLSPYLAFGCLSMREVYQ
ATENRIAGIKQSHIPAKVQWRQAMRSFSARLRWHCHFMQKLEDEPRIEFKNMHTIYDGLR
TPDLNQTYFEAWRNGRTGFPMIDACMRALIATGWINFRMRAMLMSFASYHLWLDWRQPAL
YLARLFTDYEPGIHYPQVQMQSGTTGINSIRIYNPIKQGIEQDPEGDFIRQWIPELVDMP
APFIHQPWTRPSLMNGYPEPIVEEKAARQSAAAKIYALRKQSQHRQQAEIIVKKHASRKR
TSHKKKQKTPSWQQGELPL
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaatattgtttggtttaaacgcgatttacgtattcaagatcatggagcattgaccctg
gcagctgagcaaggtcctattctgcctgtttatgtgtttgaagcagagctttggcagcaa
ggtgatatgtctcgcagacaatacctgtttctaaaagaatgtttgtacgaactcaatcag
gtattaacagcaagaggatgcccactcatcgttcgggtcggcgaagcggtaaacgttttt
gaatcattacgtcagcaatatgccatcactgatgtatggtcacaccaggaaacctggaat
ggttggacttatcaacgagacattgcagttcaaacctgggctgaccatcaccatgttaat
tggcatcaacctcgccagcatggtgtgattagacgacttaaagatcgcgatggatgggcc
agacgctggtatcagcatatgaatcaagcatgttatgtatgcccggataaactcagcgga
ccaagtgaaaaaaatgactacctacctagtccggataagcttggcttgagtgatgatgga
tgtagccaaagacagaaaggtggtagggaacaaggacttcgtcttttagatacgttttta
catcagcgtgggcaggggtatacaaaggaaatgtcctcaccgctgacagcagtagatagt
tgctctcgactctcaccttacctggcatttggctgcttatcgatgcgagaggtttaccaa
gctacagagaatcgtattgccggtattaaacagagtcatattccggcaaaagttcagtgg
cgacaagcaatgcgttcattctcagcgcgtcttcgttggcattgtcattttatgcaaaaa
ctggaagatgaaccgcgtatagagtttaagaatatgcatacgatatatgatggcttgcgt
acacctgatctcaaccagacttattttgaggcatggcgaaatgggcggactggctttcct
atgattgatgcctgtatgcgcgcattaattgctacaggctggataaattttcgcatgcga
gccatgttaatgagttttgccagttatcatctttggttagattggcgacaacctgcgtta
tatctggcgagattatttacggattacgaaccaggcattcattaccctcaggtacagatg
cagtcaggcacaacaggtattaacagtatccgtatatataaccccattaaacaaggtatc
gaacaagatccagaaggggactttatcaggcaatggatacctgagttggttgatatgcct
gccccttttattcatcaaccgtggacgcgtccgtcactaatgaatgggtatccagagcct
atcgtggaggaaaaagctgccaggcaatctgctgctgcaaagatttatgccttaaggaaa
cagtcccagcacaggcaacaggctgagatcattgtaaaaaaacacgccagtcgtaaacgt
acctctcataaaaagaaacagaagacaccatcctggcaacaaggcgaacttccgctataa
DBGET
integrated database retrieval system
