Methylophaga marina: GCM100_01060
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Entry
GCM100_01060 CDS
T09183
Name
(GenBank) TonB-dependent receptor
KO
K16091
Fe(3+) dicitrate transport protein
Organism
mmaf
Methylophaga marina
Brite
KEGG Orthology (KO) [BR:
mmaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mmaf02000
]
GCM100_01060
Transporters [BR:
mmaf02000
]
Other transporters
Pores ion channels [TC:
1
]
GCM100_01060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
BDZ72387
LinkDB
All DBs
Position
101939..104110
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AA seq
723 aa
AA seq
DB search
MELRRKLSKSAMLSSLIMASLSAHAEEERDAVEVDKMTVTGILPDKLEAVPGSFDIIDED
YLDTRRPISNIERLRTVPGINIVPDGSMGFDTNIGIRGQNPRRSAKAMIMEDGIHLQLAP
YGDPVVHYTPPSTALSRIEVIKGAGQILYGPQTLGGAVNFVTKPVPRSGKVEGTITSAFG
NQNYRLLDGAIGYGNELGGFTFGFTQNKGDGVYDHSEFDVKDYRFKGELDITERQTLGLK
LVHTRDRRNSTEAYLTPYEYDRDPYSHPSIQNDEWEQDRDVVQLQHIFRVNDKFKLTSQA
YYTDTFRNGLRSTEENEGDLDSNGNIVSLFRNCPGQGDEGVSATDVNASLCAGRHAPRQY
YTRGVETRGDISYSLFDLEHDTIFGVRYHEENIHRQEILSQSVAERESYKLALANNPGDV
EEAKIKTHALSYYLQNTTYVGNWSFTPGFRVEDVRTSEEFYEGGVQNNREALSYTEFLPS
FGVAWNGITGTTVFAGVHKGIAPARADREFTEDGGRAEPEESTLYEVGFRSRYFKGINVE
ATLFHNDIQNTLVDFGDTFDNSGDSEQTGIELSGRINFGDIFDWTNNIYLSGAYTNLWTA
EYKDGPDPSINGNRMQYAPEHMLNMDLGYEHQSGVNARIGVQHVSKQFVDDGNTRNEDVS
GLQGTIPGFTIWNAGVNYAVPNSGITVFAIVENLFDKEYLVSRNEGKLVGRERLFFGGIT
YDF
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggaattaagaagaaaactgagtaaaagtgcgatgttatcatcgctcatcatggcctca
ttgagtgctcatgctgaggaagaaagagacgctgttgaagtagacaaaatgaccgtcacc
ggaattcttccggataaattggaagccgttcccggttcattcgatattatcgatgaggat
tacttagatacgcgtcgtccaatttctaacatagaaaggttacgtacagtgcccggtatc
aatatcgtacccgatggcagcatgggctttgataccaatattggtatcaggggacagaac
ccacgtcgaagtgccaaagccatgattatggaagacggtattcacctacaactggctcct
tatggcgatcctgttgtccattacacaccaccatcaacggcattaagtcgtatcgaagtc
atcaaaggcgccggtcagattttatatggcccacaaacattaggcggcgcggtaaacttc
gtgactaaacctgttcctcgaagtggcaaggtcgagggtaccatcacatccgctttcggt
aatcagaattatcgtttactggatggtgcgataggctatggtaacgagttaggcggattc
acttttggctttacccagaacaaaggtgatggtgtctatgatcacagtgaatttgatgtc
aaagattaccgattcaaaggtgagctcgacattaccgaacgtcagacattaggcttgaaa
ttagttcacacgcgtgacagacgtaattctacagaggcctatttaacaccttatgaatat
gatcgtgatccttactcgcatccctctattcaaaatgatgaatgggaacaagatcgtgac
gtcgtacagttacaacatattttccgtgttaacgataaattcaaattaacctcacaggct
tactacaccgacacattccgtaatggtctacgcagtacagaagagaatgaaggcgatctg
gatagtaacggtaatatcgtgtcgttattcagaaactgcccaggacaaggtgacgaagga
gtctcagctactgatgtcaatgccagcttatgtgcgggtcgacatgcacctcgtcaatat
tacacgcgtggtgtagaaacacgtggtgacatttcttatagtttatttgacttagaacac
gacaccatatttggtgttcgctatcatgaagagaacatacaccgtcaagagatcctgtcg
cagagtgttgctgagcgtgagagttataaattagcactggcaaacaatccaggtgatgtg
gaagaagcaaaaattaaaacgcacgctttatcctattatttgcaaaatacgacgtatgta
gggaactggtcattcacaccaggttttcgcgtagaagatgttcgtaccagcgaagaattc
tatgaaggcggtgtccagaataaccgtgaagcgttgtcatacactgagtttttaccgagt
tttggcgttgcatggaatgggattacaggtaccacagtctttgctggagtacataaaggc
atcgcaccagctcgggctgatagggagtttactgaagacggcggtcgtgctgaacctgaa
gaaagcaccttatatgaagttggtttcagaagccgttacttcaaaggtatcaatgttgaa
gctacattgttccacaatgatattcaaaataccttagtggactttggtgatacattcgat
aatagtggtgatagtgaacaaaccggtatcgaactctcaggccgtatcaactttggtgat
attttcgactggacaaataatatctatctatcaggtgcttatactaacttatggacagct
gaatacaaagatggacctgatccgtcaatcaacggtaacagaatgcagtatgcacctgaa
catatgttaaatatggatctgggatatgaacatcaaagtggtgtgaatgccagaattggt
gtccagcatgtgagtaaacaatttgttgatgatggtaatactcgtaacgaagatgtcagt
ggactgcaaggcactatcccaggattcactatctggaatgcgggtgtgaattacgccgtg
ccaaactcaggtattaccgtctttgctattgttgaaaacttattcgacaaagagtatctg
gtcagtcggaatgaaggtaaattggttggtcgtgaacgcttgttctttggtggtattacc
tacgacttctaa
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