Methylophaga marina: GCM100_01180
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Entry
GCM100_01180 CDS
T09183
Name
(GenBank) LysR family transcriptional regulator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
mmaf
Methylophaga marina
Brite
KEGG Orthology (KO) [BR:
mmaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmaf03000
]
GCM100_01180
Transcription factors [BR:
mmaf03000
]
Prokaryotic type
Helix-turn-helix
LysR family
GCM100_01180
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
HTH_5
UPF0122
Motif
Other DBs
NCBI-ProteinID:
BDZ72399
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Position
113543..114427
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AA seq
294 aa
AA seq
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MAKINYHHLYYFWRVALSGSITKTAEECHVSQSALSQQIKQLETTMNVKLFERAGRQLLL
TDMGKKILTYADEIFTTGEELQSFISKGGTATQKHIKIGVLTTLSRNFTESFISPLLQEP
NVSFTLTTRGMTNLLNGLSSHELDLVLTNRSVSQQNDDAIWQSQLVSRQSVSIIGPAKHN
PKKTFPHGYEKLKWVLPTKITEIRSAFDAYCATLGYEPDIIAEADDMAMLRLLVRDTGAI
TALPPVVVKDEISSGNLSEYQVLPNVYEHFYAITIKRTFVPEIVTDLLQKNIVD
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaataaactaccatcatctttattatttctggcgcgttgccctgtctggcagt
atcaccaagacagctgaagaatgtcatgtttcacaatcggcattatcacagcaaatcaaa
caactcgaaaccacgatgaacgtcaaattattcgagcgtgcaggcagacaacttttatta
acggatatgggcaaaaagattctgacctatgcggatgaaatttttacgacaggtgaagag
ttacaatcctttatcagcaaaggcggtacagcgacacaaaagcacatcaaaatcggtgtt
ctgaccaccctttccagaaactttacagagagctttattagccccttacttcaagagccc
aatgtcagctttacactcaccacgcgaggcatgaccaatctactcaatggcctcagtagt
catgaactggatctggtgctgaccaatcgctctgtcagccaacaaaatgatgatgctatc
tggcaaagtcagttggtctccaggcaatcggtatctattattggtccggcaaaacacaac
cccaaaaagacctttccacacggttatgaaaaactgaaatgggtactgccaaccaaaatc
actgaaattcgttcggcttttgatgcctactgtgccacgctcgggtatgagccggatatt
attgccgaagccgatgacatggcgatgttacgactattagtacgtgataccggcgccatt
actgccctgcctccggttgtcgtcaaagatgaaatatccagtggcaatttgtctgagtac
caagtgttacccaatgtctacgaacacttttacgccatcaccattaaacggacattcgta
cctgaaattgtgaccgacctgctacaaaagaatattgtggattaa
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