Methylophaga marina: GCM100_02970
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Entry
GCM100_02970 CDS
T09183
Symbol
clp
Name
(GenBank) CRP-like protein Clp
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
mmaf
Methylophaga marina
Pathway
mmaf02020
Two-component system
mmaf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mmaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GCM100_02970 (clp)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GCM100_02970 (clp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmaf03000
]
GCM100_02970 (clp)
Transcription factors [BR:
mmaf03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
GCM100_02970 (clp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Crp
HTH_Crp_2
HVO_A0261_N
TrmB
HTH_11
MarR
HTH_28
HTH_Cmi2_C
Rrf2
EAP30
TnsD
SgrR_N
Motif
Other DBs
NCBI-ProteinID:
BDZ72578
LinkDB
All DBs
Position
complement(288730..289416)
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AA seq
228 aa
AA seq
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MDYHRHKAIEQGLAEFFRCCHTKTYPAKNIIVRPGDPPHTLYYIREGSVSVCMENEEGEE
LIVAYLNQGDFIGEIGMFSDVGERMVTVRARTDVRTEEISYQQIMNLSKTQLKECYPTLL
FTIAEQLAKRLLSTTRKATDMAFLDVAGRVEAALHELAAQPDAMRHPDGMQIKVTRQEIS
RMVGCSREMVGRVLKELQDNGLLWAKGKTMIIYDEEHRHKKPLVKKLG
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggactatcatagacacaaggccattgagcaaggattagcagagttttttcgctgctgt
cacacaaaaacctatccggcgaaaaatatcattgttcgtcctggtgatcctcctcacacg
ctttattacatccgtgaaggctctgtcagtgtttgtatggagaacgaagaaggcgaggag
ctcatcgtcgcttatctgaaccagggtgattttattggtgaaattggtatgttttccgat
gtcggtgagcgtatggtcactgtccgtgccagaacggatgtccgaaccgaagagatttcg
tatcaacaaatcatgaatctctcaaagactcagttaaaagagtgttacccaacactgtta
tttaccattgcagaacaattagcgaaacgtttgttatcaacgactcgtaaagccaccgat
atggcatttcttgatgtggcaggtagagtcgaggcggctttacatgaattagcggcacaa
ccagatgcaatgcgtcatcctgatggcatgcaaatcaaggtcacacgccaggaaattagc
cgtatggtcgggtgttctcgagaaatggttggccgtgtactaaaagagttacaagacaat
ggcctgttatgggcaaaaggaaagacgatgatcatctatgatgaagaacatcgtcataaa
aaacctttagtaaaaaagcttggctaa
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