Methylophaga marina: GCM100_03680
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Entry
GCM100_03680 CDS
T09183
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mmaf
Methylophaga marina
Brite
KEGG Orthology (KO) [BR:
mmaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmaf03016
]
GCM100_03680 (truA)
Enzymes [BR:
mmaf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
GCM100_03680 (truA)
Transfer RNA biogenesis [BR:
mmaf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GCM100_03680 (truA)
Prokaryotic type
GCM100_03680 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF503
WVELL
Motif
Other DBs
NCBI-ProteinID:
BDZ72649
LinkDB
All DBs
Position
complement(366661..367440)
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AA seq
259 aa
AA seq
DB search
MRIALGIEYAGTYFCGWQIQSHSRTVQGELQKAVSVVANHPVEVYAAGRTDTGVHGLNQV
VHFDTDSIREKRGWLLGINANLPKDVNVTWVEFVDDDFHARFSAIKRSYRYLILNRLSRS
SIHQHRMWWHYPPLDIERMQAAADQLVGQHDFSAFRASECQAKSPIKTLDKISISQQQDC
IAIDVEALSFLHHMVRNLVGVMTAIGDGSKPVEWAGEVLRSTDRSQGGITAPAEGLYLVD
VRYPEQYSIPAVSAFPVLW
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
gtgagaatagcactcggcatagagtatgccggcacgtatttttgtggttggcaaattcag
tcccattccagaaccgtacaaggtgaactgcaaaaggcggtttctgttgtagctaaccat
ccggttgaagtgtatgccgctggacgcaccgacacaggtgtccatggcctaaatcaagtg
gtgcactttgatacagactcaatcagagaaaagcgaggctggcttttaggtatcaatgca
aacttacctaaagatgtgaatgtcacttgggtagagtttgtagatgatgatttccatgcc
agattttccgctatcaaacgaagctaccggtatctgatcttaaaccgtctgagccggtca
tcaattcatcagcatagaatgtggtggcactatccgccattagatattgaaaggatgcag
gccgctgcggatcaattagttggacaacatgatttctcagcatttagagcgagtgagtgc
caggcaaaaagcccaatcaagaccttagataaaattagcatcagtcagcaacaagactgt
attgcgattgatgtcgaagcactatcatttctacatcacatggtaagaaaccttgttggt
gtcatgacagctattggcgatggtagtaaacctgttgaatgggctggtgaggtcttgcgc
agtaccgatagaagtcaaggtggcataactgcgccagcagaggggttatatctggtggat
gttcgttatccagagcaatattcaatcccggcagtgtcagcttttccggtgctctggtaa
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