Methylophaga marina: GCM100_03860
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Entry
GCM100_03860 CDS
T09183
Symbol
lptD
Name
(GenBank) LPS-assembly protein LptD
KO
K04744
LPS-assembly protein
Organism
mmaf
Methylophaga marina
Brite
KEGG Orthology (KO) [BR:
mmaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mmaf02000
]
GCM100_03860 (lptD)
Transporters [BR:
mmaf02000
]
Other transporters
Pores ion channels [TC:
1
]
GCM100_03860 (lptD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptD
LptD_N
LptD_2
LptC
Motif
Other DBs
NCBI-ProteinID:
BDZ72667
LinkDB
All DBs
Position
complement(385427..387685)
Genome browser
AA seq
752 aa
AA seq
DB search
MRKKKLLSTLLLSLSAGVASAQQEQGLTCHFGYEDQFLPIPTETASENESPVDVKANRVQ
LLQNGTSVFSGNVDILRDNQLLSAERATYNRNSGDVRASGNVSVRDSEMVIESEQAEWSV
ANDQGQMLNAQYHIRQMHARGEAAHILRKGQKTTDLDDATYTTCPEDSDAWQLKADTVHL
DHETAVGEAKNVVVRMGGWPVFYTPYINFPLNDQRKSGFLIPSVGSSDKTGFDVLTPYYW
NIAPNMDATLTPRYMSDRGLMLGGQFRYLFESGEGEVEATYLNSDDLQTNGEDINPHYQE
DRKLFSWQHRSYFDNRWRAIVDYNYVSDDEYFEDFGSGLSLSSRTYLNRNVETGYSGDIW
SFTARAQGYQTLGDDVEEQYKRLPQLVLKGYLPDQALGLTYELDSEYVEFDHNEKVDGQR
INIEPAISMPMGTAAFFATPRLALNHTQYSLKNDDSNTYDDSATRTLPIASFDTGLFFDR
EMTAWGDNYIQTLEPRAFYLYVPERDQTDIPDFDTSLTTFNSLRLFSHNRFIGRDRIGDA
NQLTLAVTSRIIDEESGKENLRLTVGQIRYFTDQRVMLDGTIAERDSTSDMVAEAVAYIG
DEWSFNSEFQWDPSGLKSNMSSVGLRYKNDSGGIFNISHRYRRDDPTPNNGIEESLEQID
ISTQIPLSERWKFFGRWYHAIDQGETLEKIAGLQYDSCCWATRLVMRDYVNDVSDQERNT
AIYLQIELKGLGSFGQKSDSLLERSIRGFEAE
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaaaagaagctattatcaaccttgttactatccttatcagctggcgtcgcatct
gcgcaacaagagcaagggttaacttgtcactttggttatgaagatcaatttttacccatt
cctacagaaacagcttccgagaatgaatcgcccgtcgacgtaaaagctaacagagtacaa
ctgttacagaatggcacctctgtattttctggtaacgttgatattcttcgtgataaccaa
ttactgagtgctgaaagagcgacctacaaccgcaacagtggcgatgtaagagcgagtggc
aatgtcagtgttcgtgatagtgaaatggtgattgagtcagagcaggccgagtggtctgta
gcaaatgatcaagggcagatgctgaatgcgcaataccatatccgtcaaatgcatgctcga
ggtgaagcagcacatatattaagaaagggtcagaaaaccacagatcttgatgatgccact
tatacaacatgtcctgaagacagtgatgcttggcaattgaaagcagatacagtccattta
gatcatgaaacggctgtgggtgaagcaaaaaatgttgtggtcaggatgggcggatggcct
gttttttataccccttacatcaactttcctttaaatgatcaacgaaaatcaggctttttg
attccttctgttggtagtagtgataaaaccggctttgatgttcttacaccatattactgg
aatatagcaccgaatatggatgccacgctgacaccacgttatatgtcggatcgaggcttg
atgctgggtggacagttccgatacttatttgagtcaggagagggtgaagttgaagcaacc
tatctgaattcagatgatttgcaaaccaatggtgaagatatcaacccgcactaccaggaa
gatagaaaactattttcatggcagcacagaagttatttcgataaccgttggagagcaatc
gttgattacaactatgtctctgatgacgaatattttgaagactttggatcagggctgagc
ctctccagtcgcacttatttaaatagaaatgtggaaacaggctatagcggtgatatatgg
agctttaccgccagagcgcagggttaccagaccttaggagatgatgtggaagagcagtac
aaacgcttaccacagctggttttaaaaggttatttacccgatcaggcattaggtctgaca
tatgaattagatagtgaatacgttgaatttgatcacaacgaaaaagtggatggtcaacgc
attaacatcgaaccagcaatcagcatgcctatgggtacggccgcattctttgctacgcca
aggttagccttaaaccatacccaatacagtttgaaaaacgacgatagcaatacctacgat
gatagtgcgacaagaactttaccgattgccagctttgatactggcttgttttttgaccgt
gaaatgacagcgtggggtgataattacatccaaacattggaacctcgcgcattttatttg
tatgtacctgagcgggatcaaactgatattcccgactttgataccagtttgaccacgttc
aactcactacgcctattttctcacaaccgttttattggtcgagatagaattggtgatgcc
aatcagttaactctggctgtcaccagtcgaattattgatgaagagtcaggtaaagagaac
ttgagattaacggttggtcagattcgatatttcactgatcagcgtgtcatgttagatggc
acaattgctgaacgagattctacctcagatatggtggcagaggctgtggcctacattggc
gatgagtggtcatttaatagtgaatttcaatgggacccaagcggcttgaagtcgaatatg
tcatcagtaggattgcgttataaaaatgatagcggtggtattttcaatatttctcatcgt
taccgtcgtgatgacccaacaccgaataatggtattgaagagtcattggaacaaattgat
atttccacgcagattccattatcagaacgttggaaattctttggtcgttggtatcatgct
atcgatcaaggtgaaacgttggaaaaaattgctggcttacaatatgacagttgctgctgg
gcaacacgcctagttatgcgtgattatgtgaacgatgtttccgatcaagagcgcaataca
gcgatttacctacaaatagaattaaaaggcttaggtagtttcggtcaaaaatctgatagc
ttacttgaacgcagtattcgtggtttcgaagcggaatga
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