Methylophaga marina: GCM100_04960
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Entry
GCM100_04960 CDS
T09183
Symbol
thrS
Name
(GenBank) threonine--tRNA ligase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
mmaf
Methylophaga marina
Pathway
mmaf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mmaf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GCM100_04960 (thrS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mmaf01007
]
GCM100_04960 (thrS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmaf03016
]
GCM100_04960 (thrS)
Enzymes [BR:
mmaf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
GCM100_04960 (thrS)
Amino acid related enzymes [BR:
mmaf01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
GCM100_04960 (thrS)
Transfer RNA biogenesis [BR:
mmaf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
GCM100_04960 (thrS)
Prokaryotic type
GCM100_04960 (thrS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
tRNA-synt_His
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
BDZ72777
LinkDB
All DBs
Position
complement(504186..506111)
Genome browser
AA seq
641 aa
AA seq
DB search
MISVTLPDGSQRQFDHPVSIHDVAADIGTGLARAALAGKVDGKLVDTSFVIEQDAEVAII
TERDEDGLDVIRHSTSHLMAQAVKQLYPEAQVTIGPVIEDGFYYDFSYKEAFTPDDLAKI
QKRMEEIVKQDLPVVREEISRDAGIELFRDMGEIYKAEILEDIPQGETLSIYRQGDFVDL
CRGPHVPSTGKLKAFKLMKLAGAYWRGNSDNEMLQRVYGTAWQDKKALKAYLHRLEEAEK
RDHRKIAKNLDLFHLQEEATGMIFWHDNGWQIYRVVENYIRDVLRNNGYQEVRTPQVVDR
TLWEKSGHWDKFGDMIFSTHSENRDYAVKPMNCPCHIQIFNQGLKSYRDLPLRMAEFGSC
HRNEPSGTLHGLMRLRGFTQDDAHIFCTEDQIQSEVATFIDLLHEVYADFGFNEIIVKLS
TRPESRVGSDEVWDKAEHALEQALNAAELDWDLQPGEGAFYGPKIEFSLKDCLGRVWQCG
TIQVDFSMPGRLDATYVADDGSKQVPVMLHRAILGSLERFIGILIEEYAGAFPTWLAPKQ
VVVMGISDKQSEYVRNITNNLQKQGFRVDSDLRNEKIGFKIREHTLRRVPYLIVVGEREA
ENNAVAVRTRKGEDLGAMQLEDFVGLLQKDVASRGRIIIED
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgatttcagtaacacttcccgacggctctcaacgccaattcgatcatcccgtttctatc
catgatgttgccgctgatattggtactggtttagcccgtgctgcattagccggtaaagtt
gatggaaagctggttgatacgtcattcgtcattgaacaggatgctgaggtagccatcatc
actgagcgtgatgaagatggtctggatgtcatccgtcactctacatcacatctaatggct
caggctgtaaaacagctctatcctgaagcacaagtcaccatcggtccggtgattgaagat
ggcttctattatgatttctcatataaagaagcgtttacgccggatgatttagctaagatc
cagaagcgtatggaagagatcgtgaagcaagatcttccagtggttcgtgaagaaatctct
cgtgatgcgggtatcgagttattccgtgatatgggtgaaatctataaagctgaaatcctg
gaagatattccgcaaggcgagactttatctatctatcgccaaggtgattttgtcgattta
tgtcgtggtcctcacgtaccaagcacaggtaagttaaaagccttcaaattgatgaaattg
gcgggtgcatactggcgtggtaactctgataacgaaatgttacaacgggtatacggtact
gcctggcaagataaaaaagcccttaaggcttatttacatcgtctggaagaagctgaaaag
cgcgatcatcgtaaaatcgctaaaaatcttgatctattccatttgcaggaagaagccaca
ggcatgatcttctggcacgataatggttggcagatttatcgtgttgtcgaaaactatatt
cgtgacgtgttacgcaataatggttatcaggaagtgcgcacacctcaggttgtcgatcgc
actttgtgggaaaaatcaggtcactgggataaatttggcgatatgattttcagtacccat
tcagaaaatcgtgactatgccgtgaaaccaatgaactgtccttgtcatattcagattttt
aatcaaggtctgaaaagctacagagatttgccactacgtatggctgaatttggttcatgt
catcgcaacgaaccgtcaggtactttacatggcctgatgcgtttacgcggatttacccaa
gatgatgcgcatattttctgtactgaagatcaaattcagtcagaggtcgccacttttatt
gatttattacacgaggtttatgccgacttcgggttcaatgaaatcatcgttaaattatcg
actcgtcctgaaagtagagtagggagcgatgaggtatgggacaaggctgaacatgcccta
gaacaggcattaaatgccgcagaattagactgggacctacagccaggtgaaggcgcattc
tacggaccaaagattgaattctcattaaaagattgtcttggccgtgtgtggcagtgcggt
actattcaggttgacttctcaatgcctggtcgtctggatgcgacatatgtcgcagatgat
ggcagtaaacaagtgccagttatgctgcacagggcaatacttggttctttagaaagattc
atcggtatcttaatagaagagtatgctggtgcattcccaacatggcttgcacctaagcaa
gtggtggtgatgggaatcagtgataaacaatctgaatatgtcagaaatatcaccaacaat
ttgcagaaacaaggatttagagtcgattcggacttgagaaacgagaagattggctttaaa
atacgcgagcacactttacgtcgcgtcccctacttgattgtggtgggtgagcgtgaagca
gaaaataatgccgtggcagtacgcactcgaaaaggcgaagacctaggtgcaatgcaactt
gaggactttgttggcttgctacagaaagatgttgcgagtcgcggtcgaataattatagag
gattag
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