Methylophaga marina: GCM100_05580
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Entry
GCM100_05580 CDS
T09183
Symbol
fdsA
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
mmaf
Methylophaga marina
Pathway
mmaf00630
Glyoxylate and dicarboxylate metabolism
mmaf00680
Methane metabolism
mmaf01100
Metabolic pathways
mmaf01120
Microbial metabolism in diverse environments
mmaf01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
mmaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
GCM100_05580 (fdsA)
09102 Energy metabolism
00680 Methane metabolism
GCM100_05580 (fdsA)
Enzymes [BR:
mmaf01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
GCM100_05580 (fdsA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_Nqo3
Fer4_10
Fer4_8
Fer4_21
Fer4_9
Fer4_6
Fer4_2
Fer4_4
Fer4_16
Fer4_15
Fer4_13
pPIWI_RE_Z
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
BDZ72839
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Position
complement(560622..563495)
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AA seq
957 aa
AA seq
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MRIETFNPNKDYGTPARVSETLVTVEIDGVEITVPEGTSVMRAASLANINIPKLCATDNL
ESFGSCRLCAVQIEGRRGYPASCTTTVDEGMKVTTQNSKLAKLRRNVMELYISDHPLDCL
TCPANGNCELQDMAGDVGLREVRYGYQGENHLDSEKDNSNPYFSFDPSKCIVCSRCVRAC
EEVQGTFALTIDGRGFDSKVAAGQDEDFMDSECVSCGACVQACPTSTLMEKSIIEMGQPE
HSVVTTCAYCGVGCSFKAEMKGDQVVRMVPYKGGDANHGHSCVKGRFAFGYATHKDRIKA
PMIRESITDPWQEVSWEEAINFAATRLKDIQAKYGRESVGGITSSRCTNEESYLVQKLVR
AAFGNNNTDTCARVCHSPTGYGLKVTMGESAGTQNFDSVMKSDVIMVIGANPTDAHPVFG
SLMRRRLREGADLIVADPRHIDLLKTPHLKKAQHLALRPGSNVALVNAIAHVVVTEGLED
RAFVEKRCDMESYEKWREFIRDERHSPEAVEATTGVAADKVRQAARTYATAKNGAIYYGL
GVTENSQGSTMVMGIANLAMATGNIGREGVGVNPLRGQNNVQGSCDMGSFPHELPGYQHV
SDDTARTHFESVWGVKLDNEPGLRIPNMFDSAIAGEFKALYVQGEDIAQSDPGTQHVEKA
LRSLECLIVQDLFLNETAKFAHVLLPGSSFLEKNGTFTNAERRINRVRKVMPALAGKEDW
EITVDLSNALGYPMHYNHPSEIMDEIASLTPTFTGVNYDRLDELGSIQWPCNDENPVGMP
TMHVDDFPIGKGRFSVTEYVATDERTNSRFPLLLTTGRILSQYNVGAQTRRTENQAWHDE
DVLDIHPSDAELRGIKENDWLGITSRAGQTVLRARITDKVLPGVVYTTFHHPGSGANVIT
TDNSDWATNCPEYKVTAVQVERVSQPSEWQQNFKSFEALQMKLLKGADTAHSEVEAE
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgagaattgaaacatttaatccaaataaagactacggtacaccagctcgtgtatcggag
accttagtaacagtagaaattgatggcgtggaaatcacggttccagaaggaacgtcagtg
atgcgtgccgcctcattagcgaatatcaatattccaaaattatgtgccaccgacaatctg
gaatcctttggttcctgtcgtttatgtgctgttcagattgaaggacgacgtggctatccg
gcttcatgtacaacaactgttgatgaaggcatgaaagtcaccacgcaaaacagcaagtta
gcgaaattacgcagaaatgtgatggagctgtacatctcggaccatcctctagattgtttg
acttgccctgccaacggtaactgtgaactacaggacatggccggtgatgtagggctgcgt
gaagtacgttatggctatcagggtgaaaaccatctggatagtgaaaaagacaattccaat
ccgtatttcagcttcgatccaagcaaatgtatcgtttgttcacgttgtgtacgtgcctgt
gaagaagtgcagggcaccttcgctttaaccattgatggtcgtggttttgattcgaaagtc
gcagcgggtcaagacgaagactttatggattcagagtgtgtgtcttgtggtgcctgtgta
caggcatgcccaacgtccaccctgatggagaaaagtatcatcgaaatggggcaacctgaa
cacagtgttgtcactacatgtgcctattgcggtgtcggttgctcattcaaagcagaaatg
aaaggcgatcaggttgttcgcatggtgccttataaaggcggtgatgcaaaccatggtcac
tcttgtgtgaaaggccgttttgcctttggttatgcgacacataaagaccgcattaaagcg
ccaatgattcgtgagtcgatcacagacccttggcaggaagtcagctgggaagaagcgatt
aactttgcagcgacgcgtttaaaagatattcaagcgaaatatggtcgtgaaagtgtcgga
ggtattacctcatcacgttgtactaatgaagaaagttatctggttcaaaaattagttcgt
gcggcgtttggtaataacaacacggatacctgtgcacgcgtatgtcactcaccgactggt
tatggtttgaaagtcaccatgggtgaatctgcgggtacgcagaacttcgattctgtgatg
aaatctgatgtcattatggttatcggtgctaacccaacagatgcgcatccggtgtttggt
tcattaatgcgtcgtcgtctgcgtgaaggggctgatctaattgtggccgatccacgtcat
attgatttgctaaaaacaccacatctgaaaaaagcacagcatttagccttacgtcctggt
tctaacgtggcattggtcaatgcaattgcccacgttgtggtgaccgaaggactggaagac
agagcgtttgttgaaaaacgttgtgatatggaaagctatgaaaaatggcgtgaattcatt
cgtgatgaacgtcattcacctgaagcggttgaagcaacaacaggtgttgcggcagacaaa
gtgcgtcaagcggccagaacttacgcaacagcgaagaacggtgcgatttactacggtctt
ggtgtcaccgaaaatagccaaggttcaactatggtcatgggtattgctaatctcgccatg
gcaacgggtaatatcggtcgtgaaggtgtgggtgtaaacccattacgtggtcagaataat
gtgcaaggttcatgtgatatgggctcgttcccacatgagctgccaggttatcagcacgtt
tcagatgacacagcacgcacacacttcgaatcagtctggggtgtgaaactggataatgag
ccaggcctgcgtattccaaacatgtttgattcagccattgctggcgaatttaaagcctta
tatgttcagggtgaggatattgctcagtctgaccctggcacacaacatgttgaaaaagcc
ttacgttctttagagtgcttgattgttcaggatctgttcctgaatgaaacagccaagttt
gctcatgtgttattgccggggtcttcattcctggagaaaaacggtacattcactaacgcg
gagcgtcgtatcaaccgtgtacgtaaagtgatgccagcattagccggtaaggaagactgg
gaaatcacagtcgatttatcgaatgctctcggttatccaatgcattacaaccatccatca
gaaattatggatgaaattgcctcgctgacaccgacctttaccggtgtgaactatgatcgt
cttgacgagttgggcagtattcaatggccatgtaatgatgaaaatccagttggcatgcca
accatgcatgtggatgacttcccgattggtaaaggtcgtttcagtgttacagagtatgta
gcaacggatgaacgtactaacagtcgtttcccattattactgacgacaggccgtatcttg
tctcaatacaacgtgggtgctcaaactcgtcgtacagagaatcaggcatggcacgatgag
gatgtgttagatattcacccatctgatgcggagttacgtggtattaaggaaaacgattgg
ttaggtatcaccagccgggccggacaaacggtattgcgtgctcgtattaccgataaagtc
ctaccgggcgtcgtgtacaccacatttcatcatcctggaagtggtgccaacgtcattacc
actgacaactctgactgggcgaccaactgtcctgagtataaagtgacagctgttcaggtt
gagagagtcagccaaccttcagagtggcagcaaaacttcaaatcatttgaagcgttgcag
atgaaactactgaaaggggcagacaccgctcattcagaggtagaagctgagtaa
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