Methylophaga marina: GCM100_05790
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Entry
GCM100_05790 CDS
T09183
Symbol
rnc
Name
(GenBank) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
mmaf
Methylophaga marina
Pathway
mmaf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mmaf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GCM100_05790 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmaf03019
]
GCM100_05790 (rnc)
03009 Ribosome biogenesis [BR:
mmaf03009
]
GCM100_05790 (rnc)
03036 Chromosome and associated proteins [BR:
mmaf03036
]
GCM100_05790 (rnc)
Enzymes [BR:
mmaf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
GCM100_05790 (rnc)
Messenger RNA biogenesis [BR:
mmaf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GCM100_05790 (rnc)
Ribosome biogenesis [BR:
mmaf03009
]
Eukaryotic type
90S particles
RNase
GCM100_05790 (rnc)
Prokaryotic type
rRNA processing factors
GCM100_05790 (rnc)
Chromosome and associated proteins [BR:
mmaf03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
GCM100_05790 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
BDZ72860
LinkDB
All DBs
Position
complement(586802..587449)
Genome browser
AA seq
215 aa
AA seq
DB search
MITQRQKALCKQLKVEFKDTAFLQQALTHRSADPKNNERLEYLGDAILSFVIAEELFNRF
PQVKEGKLSRLRASLVKGETLAELGRELKLGDVLILGPGELKSGGFRRESILADAVEAIL
GALYLDSGLTPVKELILRLFAERIASIDVTETVKDPKTRLQELLQSRKQPLPLYSVKELK
TDKKQPVFEASCQVTLLDKVVVAQGSSHRKAEKSR
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgataacccagcggcaaaaagccctgtgcaaacagttaaaagtagaatttaaagatacc
gcatttttacaacaagccttaacgcaccgcagtgcggatcccaaaaataatgagcgtctt
gaatatctcggtgatgctattttgagttttgtgattgcggaagagttattcaaccgtttc
cctcaagttaaggaaggaaaattaagccgtctacgggcttctctggtcaaaggtgaaacc
ttagctgagctggggcgcgagttaaagttaggggatgtattaatcctcgggccaggtgaa
ctaaaaagtggtggttttcgtcgggaatcaattctggctgatgcggtagaagctatttta
ggtgcactttatcttgatagcggtctgacacctgtcaaagagctcatcttaagactattt
gccgagcgaatagcgtctattgatgtgacagaaacggtcaaggatcctaaaacgcgtttg
caggaattattacaaagtcgtaaacagcctttaccgctatatagtgttaaagaattaaaa
acagacaagaaacagcctgtctttgaagcatcctgccaggttaccttgctggacaaagtg
gtcgttgctcaaggcagtagtcaccgaaaagctgaaaaaagccgctga
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