Methylophaga marina: GCM100_06200
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Entry
GCM100_06200 CDS
T09183
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
mmaf
Methylophaga marina
Brite
KEGG Orthology (KO) [BR:
mmaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmaf03032
]
GCM100_06200 (ihfB)
03036 Chromosome and associated proteins [BR:
mmaf03036
]
GCM100_06200 (ihfB)
03400 DNA repair and recombination proteins [BR:
mmaf03400
]
GCM100_06200 (ihfB)
DNA replication proteins [BR:
mmaf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GCM100_06200 (ihfB)
Chromosome and associated proteins [BR:
mmaf03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
GCM100_06200 (ihfB)
DNA repair and recombination proteins [BR:
mmaf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
GCM100_06200 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
VWA_3
Motif
Other DBs
NCBI-ProteinID:
BDZ72901
LinkDB
All DBs
Position
complement(630868..631161)
Genome browser
AA seq
97 aa
AA seq
DB search
MTKSDLIEVLSEKQSLLNYRDVELAVKLILEQMSDSLSQGDRIEIRGFGSFTLHHRPPRV
GRNPKSGESVQLDEKYVPHFKPGKELRDRVNDAAGYQ
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatcagatttgattgaagttttatctgaaaaacaatctctattgaattatcgt
gacgttgagcttgcagttaaactcatcttagaacagatgagtgatagtttgtcacaagga
gatagaattgaaattcgcgggtttggtagttttaccttacatcatcgaccaccacgtgtc
ggacgtaatccaaaaagcggtgaatcagttcagctggatgagaaatacgtgccgcatttc
aaacctggtaaagagttgcgtgaccgtgttaacgacgcggcaggatatcagtaa
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