Methylophaga marina: GCM100_06700
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Entry
GCM100_06700 CDS
T09183
Symbol
ntrC
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K07712
two-component system, NtrC family, nitrogen regulation response regulator GlnG
Organism
mmaf
Methylophaga marina
Pathway
mmaf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mmaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GCM100_06700 (ntrC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
mmaf02022
]
GCM100_06700 (ntrC)
Two-component system [BR:
mmaf02022
]
NtrC family
GlnL-GlnG (nitrogen regulation)
GCM100_06700 (ntrC)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
AAA_19
AAA_16
FleQ
AAA_7
AAA
Motif
Other DBs
NCBI-ProteinID:
BDZ72951
LinkDB
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Position
complement(687663..689072)
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AA seq
469 aa
AA seq
DB search
MSASRAIAWIVDDDRSIRWVLQKALEVVDITVRAFETGDIALNELKQGREQRPDVLISDI
RMPGIDGLELLSEIKERYPELPVIIMTAYSDLDSAVSVYEGGAFEYLPKPFDVDEAVELV
QRAISHSREQNSEPAENVNIGTDIVGEAPAMQEVFRAIGRLARSNITVMVNGESGTGKEL
VAQALHRHSPRKHGPFIALNMAAIPKELLESELFGHEKGAFTGAHVQRKGRFEQANGGTL
FLDEIGDMPIELQTRLLRVLSDGEFFRVGGHSAVKVDVRIIAATHQNLEKLVERGDFRED
LFHRLNVIRIHIPSLRERREDIPALVAYFLNKAAKELNMSTKSVATDVEMYLSQLPWPGN
VRQLENTCRWLTVMSPGQVVQMDDLPVELSTETIDANNGRQGGDWQQLFRQWAANKALTG
QEGALADVVPLIEHLLMEVALEKTAGKRQEAAKLLGWGRNTLTRKLKEN
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgctagcagagcgatagcttggattgttgatgatgaccgatcaattcggtgggtt
ttacaaaaagcattggaagtggttgatattacagttcgcgcttttgaaaccggtgatatc
gcacttaatgagctaaaacaaggtcgtgaacaaagaccggatgtattaatcagcgatatc
agaatgcctggtattgatggtcttgaacttctatctgaaattaaagaacgctacccagag
ttaccggtgattattatgacggcctattctgatttggatagtgccgtatctgtatacgaa
ggtggggcgtttgaatatttacccaaaccatttgatgttgatgaggcggttgagctagtc
caacgggctatcagtcatagtcgtgaacagaatagcgagcccgctgaaaatgtaaatatc
ggcacagatattgttggtgaagcacctgcaatgcaagaggtttttagagcgataggacgg
ctggcgcgttcaaatatcaccgtcatggtgaatggggagtcaggaacagggaaagaatta
gttgctcaagcactgcatcgtcatagcccgagaaagcatggtcctttcattgctttaaac
atggctgcaatccccaaagagctactcgaatcagaattgtttggccatgaaaaaggggcc
ttcactggcgcgcatgtacagcgaaaaggtcggtttgaacaagctaatggcggtacctta
ttcctagacgaaatcggggatatgcctatcgagctacaaacacgactcttgcgtgtgcta
tcagatggtgagtttttccgagttggtggacatagtgcagtaaaagtagatgttcgaatc
attgccgcaacccatcaaaatcttgaaaagcttgttgagcgaggcgatttccgtgaagat
ttatttcatcggctgaatgtcattcgaattcatattccatcacttcgtgaacgtcgagag
gatattccagctttggtcgcttattttctgaataaggctgctaaagaattaaatatgtca
acgaaatcagttgcaactgatgtggagatgtatttatcccaattaccttggccaggaaat
gttcgacaattagagaacacgtgtcgttggctgacagtcatgtcacctgggcaagtcgtt
cagatggatgatttgcctgtcgagctctctacagaaacaatagatgccaataacggtaga
caaggcggtgactggcaacagttgttcagacaatgggcagcaaacaaggctttgactgga
caggaaggtgcactggcagatgttgttccacttatcgagcatttactgatggaagttgct
ctcgagaaaacagcaggtaaacgtcaggaagcagctaaattattagggtggggtagaaac
acgctgacgcgtaaactaaaagaaaattag
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