Methylophaga marina: GCM100_06880
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Entry
GCM100_06880 CDS
T09183
Name
(GenBank) hypothetical protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
mmaf
Methylophaga marina
Pathway
mmaf03030
DNA replication
mmaf03430
Mismatch repair
mmaf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GCM100_06880
03430 Mismatch repair
GCM100_06880
03440 Homologous recombination
GCM100_06880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmaf03032
]
GCM100_06880
03400 DNA repair and recombination proteins [BR:
mmaf03400
]
GCM100_06880
Enzymes [BR:
mmaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GCM100_06880
DNA replication proteins [BR:
mmaf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GCM100_06880
DNA repair and recombination proteins [BR:
mmaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GCM100_06880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DBD_Tnp_Mut
DNA_pol3_delta
Tfb2
Motif
Other DBs
NCBI-ProteinID:
BDZ72969
LinkDB
All DBs
Position
complement(704793..705551)
Genome browser
AA seq
252 aa
AA seq
DB search
MRKFASNPPQDTTLLIISGKIDARSQKAKWFTELDKLGVTIPVWPVALAQLPQWVSQRMQ
AKGLKSDPKIATLIAERVEGNLFAAAQEIEKLSLLSLDGQIDEALVLASVADNAKFEAFG
LMDAVFAGQHARIPRILSRLRAEGIDILAVFSAVSWSLQRVVDMSAQWASGESLERVFAS
QKPPVWDKNKAVMRQAIERYSHTRWQSFLQQMSDIDQAAKGMTKHCPWRLLETLCLGASG
IDIPTKILERSA
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
ttgaggaaatttgcttccaatcctccgcaggatacgacgctattaatcatcagtggcaaa
attgatgcgcgctcacagaaagccaagtggtttaccgaactggacaagttaggtgtcact
attcctgtctggccagttgccttagctcaactccctcaatgggtgagtcaacgcatgcag
gccaaaggcttaaaaagtgatcctaaaatcgctaccttgattgctgaacgcgtagagggc
aatttatttgcggccgcacaagaaatcgaaaagttgtctttactgagtcttgatgggcag
attgatgaagccttagtattagcctccgtagctgataatgctaagtttgaggcatttggt
ctgatggatgctgtgtttgcaggacagcatgcacgaatcccacgtatactatctcgtcta
cgcgcagaaggtattgatattctggctgttttctccgctgtcagttggtcactgcaacgc
gtggtcgatatgtcagcgcaatgggcttctggtgagtctttggaacgtgtctttgcctct
caaaaaccgccggtatgggataaaaataaagcggtaatgcgacaagccatagagcgctac
agccatacccgctggcaatcttttttgcagcaaatgtctgatattgatcaagcagcaaaa
ggtatgactaaacactgtccatggcgtctcctggaaacactctgtttaggcgcttcgggc
atcgatataccaacaaaaatattggaaaggagtgcttaa
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