Methylophaga marina: GCM100_07010
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Entry
GCM100_07010 CDS
T09183
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
mmaf
Methylophaga marina
Brite
KEGG Orthology (KO) [BR:
mmaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmaf03021
]
GCM100_07010 (rpoH)
Transcription machinery [BR:
mmaf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GCM100_07010 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
UCR_14kD
2Fe-2S_thioredx
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
BDZ72982
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Position
715783..716643
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AA seq
286 aa
AA seq
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MTTNVAQYDMALAPIGNLDAYTSLVHTIPVLTEEEEYDLAYRLQNEGDLKAAQRLVLSHL
RFVVRIAKGYSGYGLPVADLIQEGNIGLMKAVKRFNPEKGVRLVSFAVHWIRAEIHEYVI
RNWRIVKIATTKAQRKLFFNLRSAKQRLGWLNKEEVEAVAEDLGVTADNVMEMERRLAQP
DTSFDLPNDTDDEENHYSPIAYLAANDDSDPSNQLEDDNYADYQQQKLSNALATLDDRSR
DIIMQRWLSEDNKATLHTLADQYQVSAERIRQIENNAMKKLKHLMV
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgaatgtagctcaatatgacatggctttagctcctattggtaacttggatgct
tacaccagtcttgtgcacaccattcctgtattaactgaggaagaagaatacgacctcgcc
tatcgcctgcaaaacgaaggtgatctcaaagcagcgcaaagacttgttttatcgcatcta
cgttttgttgttcgtattgccaaaggatatagcggttatggactgcccgttgctgacctg
attcaagaaggtaacattggtttgatgaaggcagtaaaacggttcaaccctgaaaaaggt
gtgcgtttagtttcttttgctgttcattggattcgtgccgaaattcatgaatacgtgatt
cgtaactggcgcattgtgaaaattgctacgacaaaagcacaacgtaagttgtttttcaat
cttcgcagtgcaaagcaacgtcttggttggttaaacaaagaagaagttgaagctgttgcc
gaagatttaggtgtcacagccgataatgtgatggaaatggagcgtagactggcacagcct
gatacctcttttgacttaccaaatgatacggatgacgaagaaaaccattattcgccgatt
gcttatttagctgctaacgatgactcggatccttctaatcagttggaagatgataattat
gctgattatcaacaacaaaaattatccaatgcattagcgaccttagatgatcgtagcaga
gatatcattatgcagcgctggttaagcgaagataacaaagcaacgcttcatacattagct
gatcaatatcaggtgtctgcagaacgtataagacagattgaaaacaacgctatgaagaaa
ctcaaacacttaatggtgtaa
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