Methylophaga marina: GCM100_07140
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Entry
GCM100_07140 CDS
T09183
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
mmaf
Methylophaga marina
Pathway
mmaf03030
DNA replication
mmaf03430
Mismatch repair
mmaf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GCM100_07140 (dnaX)
03430 Mismatch repair
GCM100_07140 (dnaX)
03440 Homologous recombination
GCM100_07140 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmaf03032
]
GCM100_07140 (dnaX)
03400 DNA repair and recombination proteins [BR:
mmaf03400
]
GCM100_07140 (dnaX)
Enzymes [BR:
mmaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GCM100_07140 (dnaX)
DNA replication proteins [BR:
mmaf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GCM100_07140 (dnaX)
DNA repair and recombination proteins [BR:
mmaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GCM100_07140 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
AAA_22
RuvB_N
AAA_2
AAA_16
AAA_14
AAA_5
AAA_18
AAA_30
TsaE
AAA_assoc_2
PIF1
AAA_7
AAA_19
RCF1-5-like_lid
nSTAND3
DUF3646
AAA_24
Mg_chelatase
ABC_tran
Ribonuc_P_40
Motif
Other DBs
NCBI-ProteinID:
BDZ72995
LinkDB
All DBs
Position
726036..727874
Genome browser
AA seq
612 aa
AA seq
DB search
MSYLVLARKWRPKTFEQVVGQQHVLRALINGLDQNRLHHAFLFSGTRGVGKTTLARIFAK
SLNCEQGVSSTPCGECQSCVEVDSGRFVDLIEVDAASRTKVDDTRELLDNVQYAPSRGRY
KVYLIDEVHMLSTSSFNALLKTLEEPPPHVKFLFATTDPQKLPVTILSRCLQFNLRRLDI
TQISEHLSYILGQENLSFEHPALIELARAADGSMRDALSLLDQAIAFGNGNVTTDVVFQM
LGSIDQDQVYQLLSALQQGDAKALLQLSGDLAALGRDFEVILNAILDGLQKIASYQHIQD
LASEENDSSSLKNLANTFDAETVQLLYQIALHGKRDLPWAADPKSGFDMTLLRMLSFQPR
TGEPNNGNPPAKKSDTLSKPAVTEPPVTVSNANSSDSKELNASAPVLSRHEHHSEPSDST
THSAFSSQKPKAPPEKPQHKPELNHDQNIQKITDTQVNEKHTKEALADSLPSVDEETLIS
VDLSPANWTQIISELKLSALTRQLAENSAFIRCEERTLQLSLSPELAHLATSKSKERLEQ
ALQQKLDQNVSVIFNHDSDSLHSGPTVAVERAEQLAQKQQQAIESIQTDPTIEVIKNTFN
ARVIESTIKPLD
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgagttatctggttttagcccgtaagtggcgacctaaaacatttgaacaagtcgttggg
caacaacatgtcttacgtgctttaatcaacggtctggatcaaaatcgactgcatcacgcc
tttctgttttctggtacacgtggtgtaggtaaaacaacactggcgagaatcttcgccaaa
tccctcaactgtgaacaaggcgtcagctctaccccatgtggtgaatgccagagctgtgtc
gaagtagatagtggtcgctttgtcgatttaattgaggtcgatgccgcgtccaggacaaaa
gtagatgacacgcgtgaactcctcgacaacgtgcaatatgcgccaagtcgtggtcgttat
aaagtttacttaattgacgaagtgcacatgttatcgaccagtagttttaatgcgctatta
aaaacactggaagaacctcctcctcacgttaaattcttgttcgccacaacagatcctcag
aaattacctgtcaccatcttgtcgcgttgcctacaatttaacttaagacgtttggatatc
actcagattagtgaacatctgtcgtacattttaggccaagaaaatctctcatttgaacat
cccgctttaatagaactcgctcgtgcagctgatggcagcatgcgtgatgcgctgagttta
ttagatcaagcgattgcttttgggaacggaaatgtcacgactgacgtggttttccaaatg
cttggcagcatcgaccaagatcaggtctatcaattactgagcgcacttcaacaaggagat
gcaaaagcattactgcaactgtctggtgatttagcagcacttggccgtgactttgaagtt
attcttaatgcgattttggatggtttacaaaagatagcaagctatcaacatattcaagat
ttagcgtcggaagaaaatgatagctccagtctaaaaaacttggcgaacacttttgatgct
gaaaccgtgcaattactctatcaaattgctctgcatggtaagcgagatctaccatgggcc
gctgacccgaaaagcggttttgatatgacgttattacggatgctaagttttcagcctcgg
actggcgaacccaacaatgggaatcccccagcaaaaaagtctgacacacttagtaaaccg
gccgtcactgaaccgccggtaacagtcagcaatgccaacagctcagacagcaaagaacta
aacgcatctgccccggtattgagtcgacatgaacatcattcagagccgagtgactcaaca
acccattcagccttttcttcacaaaagccgaaagcgccaccagaaaagccgcagcacaaa
cctgagttaaaccatgaccagaatattcaaaagatcactgatacccaggtaaacgaaaaa
catacaaaagaagctttagctgactcgcttcccagcgtcgatgaagagactttaatcagt
gttgatttgtcccctgcaaactggacgcaaatcatttcagaactcaaactgtctgcatta
acgcgacaattagccgaaaatagcgcctttattcgatgtgaagaacgcacgcttcaacta
tctttatcgcctgaacttgctcatttagcgacctcaaaatcaaaagaacgcctcgaacaa
gcattacagcagaaactcgatcagaatgtcagtgtcatatttaatcatgattccgatagt
ttgcattcagggccgacagtagcggttgaaagagctgaacaactcgcacaaaaacagcaa
caggctattgaatctatccagactgaccccactatcgaagtgataaagaacacatttaat
gctcgtgtaattgaaagtacaataaaacccttagattaa
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