Methylophaga marina: GCM100_07890
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Entry
GCM100_07890 CDS
T09183
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
mmaf
Methylophaga marina
Pathway
mmaf00300
Lysine biosynthesis
mmaf01100
Metabolic pathways
mmaf01120
Microbial metabolism in diverse environments
mmaf01230
Biosynthesis of amino acids
Module
mmaf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mmaf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GCM100_07890 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mmaf01002
]
GCM100_07890 (dapE)
Enzymes [BR:
mmaf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
GCM100_07890 (dapE)
Peptidases and inhibitors [BR:
mmaf01002
]
Metallo peptidases
Family M20
GCM100_07890 (dapE)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Peptidase_M18
Motif
Other DBs
NCBI-ProteinID:
BDZ73070
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Position
787164..788294
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AA seq
376 aa
AA seq
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MSETIQLTQELIRRDSVTPEDKGCQIMIADRLAPYGFHAEHMCFDDVDNLWLRRGNKGPV
LAFAGHTDVVPTGPVERWSHPPFEANIVDGMMYGRGTADMKGSIAAFITACERFVKQHPD
HQGSIAFLITSDEEGPAVNGTVKVVETLQSRGEHIDWCLVGEPSSTDKVGDIVKNGRRGS
LNGRLSVIGKQGHIAYPHLAENPIHLLSPALTELCSIEWDQGNEDFPPTSFQVSNINSGT
GATNVIPGTAEVVFNFRYSTEVTHEELKQRVHAILDKHALKYELNWELSGQPFRTASGQL
LEAVQQAISDVTGYQTTLSTSGGTSDGRFIAPTGTQVIELGPLNATIHQIDECVATADLD
TLSDIYERLLSYLLVD
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaccatacaactgacccaagaattaattcgtcgtgacagtgtcacacccgaa
gacaaaggctgccagatcatgatagcggatcgactggcaccttatggtttccatgccgaa
cacatgtgtttcgacgacgtggataacctctggctacgccgaggaaataaaggtcctgtt
ctggcgtttgctgggcatactgacgttgtgccaacaggccctgtcgagcgctggagtcat
cctcccttcgaagctaatatcgtcgatggcatgatgtatggacgtggtacggctgatatg
aaaggcagtattgctgcctttatcacagcctgtgagcgctttgtcaaacaacatccagat
catcagggcagtatcgcttttctgattaccagcgatgaagaaggcccagcagtaaacggc
acggtgaaagtggttgaaaccttacaaagccgtggggaacatattgactggtgtctggtt
ggtgagccttcgagtacggacaaagtcggcgatattgtcaaaaacggtcgtcgtggctct
ttaaatggccgcctgagtgttataggtaaacaaggtcatattgcttatccgcatcttgca
gaaaatcctatccatcttctcagccctgcactgaccgaattgtgcagcattgagtgggac
cagggcaatgaagactttccgccaaccagctttcaagtgtccaatatcaactctggcaca
ggtgccaccaatgtcatcccaggcacggctgaggttgtatttaatttccgctactcaaca
gaagtcacacacgaagagttaaaacagcgtgtccatgccatattagacaaacatgcattg
aagtatgagttgaactgggagctttcaggccagccatttcgtaccgcaagcggtcaattg
ttggaagctgttcaacaggctatttctgatgtgacaggctaccagacaacactctcgact
tctggcggtacatcagatggacgctttattgcgcccactggcacacaggtgatagaactc
ggaccgttgaatgcaacgattcatcaaatagatgaatgtgttgctacagctgatcttgat
accctttcagatatttatgaaagactgctcagttatctccttgttgattag
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