KEGG   Methylophaga marina: GCM100_08630
Entry
GCM100_08630      CDS       T09183                                 
Symbol
rfbB-1
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
mmaf  Methylophaga marina
Pathway
mmaf00521  Streptomycin biosynthesis
mmaf00523  Polyketide sugar unit biosynthesis
mmaf00525  Acarbose and validamycin biosynthesis
mmaf00541  Biosynthesis of various nucleotide sugars
mmaf01055  Biosynthesis of vancomycin group antibiotics
mmaf01100  Metabolic pathways
mmaf01110  Biosynthesis of secondary metabolites
mmaf01250  Biosynthesis of nucleotide sugars
Module
mmaf_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:mmaf00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    GCM100_08630 (rfbB-1)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    GCM100_08630 (rfbB-1)
   01055 Biosynthesis of vancomycin group antibiotics
    GCM100_08630 (rfbB-1)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    GCM100_08630 (rfbB-1)
   00525 Acarbose and validamycin biosynthesis
    GCM100_08630 (rfbB-1)
Enzymes [BR:mmaf01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     GCM100_08630 (rfbB-1)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind Polysacc_synt_2 NAD_binding_4 3Beta_HSD
Other DBs
NCBI-ProteinID: BDZ73144
LinkDB
Position
complement(852861..853880)
AA seq 339 aa
MIRRLIEVSDYHIINIDKLTYAGNLESLLPVADNPRYHFEQADICDAEKMNALFKEYQPT
AIMHLAAESHVDRSIDGPADFVQTNLVGTYVLLEAARQYWKTLDKDAAAQFRFHHISTDE
VYGTLGETGLFEETTPYQPNSPYSATKAGSDHLVRAWHHTYGLPVVMTNCSNNYGPYQFP
EKLIPLIINNALVGKPLPVYGKGDNIRDWLYVDDHADALQLVLEQGKLGESYNIGGFNEH
TNLDVVHRVCDILDELLPESEHCPHRDLITFVTDRPGHDQRYAIDATKINRELGWTPKET
FTTGLRKTVEWYIDNREWNERVMDGSYQQERLGLGEQAS
NT seq 1020 nt   +upstreamnt  +downstreamnt
ttgattcgtcgtcttatcgaagttagtgattaccacattatcaatattgataaactgacc
tacgcaggtaatctggagtcacttctacctgttgctgacaatccgcgttatcattttgaa
caagccgatatctgtgatgcggaaaagatgaatgctttgttcaaggagtatcagcctact
gcaatcatgcatctagcggcagaatcacatgtcgatcgctcgatagacggacccgctgat
tttgtgcaaaccaatttagtgggtacctacgttttattagaagcggccagacagtactgg
aaaacgcttgataaagacgctgcggcacaatttcgtttccatcatatctccaccgatgag
gtatacggcaccttaggtgaaacaggcttgtttgaagagacaacaccttatcaaccaaat
tcaccctattcagcgaccaaagcagggagtgatcacttggttcgtgcatggcatcacacc
tatggtctacccgttgtcatgaccaactgctctaataattacggtccctatcagtttcct
gaaaaattgattccactgattatcaataatgcattggtgggcaaacccttaccagtctat
ggcaaaggcgataatatccgtgattggttgtatgtggatgatcacgcggatgccttacag
cttgttttggaacaagggaagctgggcgaaagctataatattggcggctttaacgaacat
accaatcttgatgttgtgcatcgtgtttgtgacattctggatgagttattacccgaatct
gaacattgtcctcatcgagatttgattacttttgtcacggatcgccctggtcatgatcaa
cgttatgcgattgatgccactaaaatcaatcgtgaattaggttggacaccaaaagaaaca
tttactactggcctacgtaaaacagtggaatggtatatcgacaaccgtgagtggaatgag
cgtgtcatggatggtagttatcaacaagagcgcttagggttgggagaacaggcatcatga

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