Methylophaga marina: GCM100_08630
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Entry
GCM100_08630 CDS
T09183
Symbol
rfbB-1
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
mmaf
Methylophaga marina
Pathway
mmaf00521
Streptomycin biosynthesis
mmaf00523
Polyketide sugar unit biosynthesis
mmaf00525
Acarbose and validamycin biosynthesis
mmaf00541
Biosynthesis of various nucleotide sugars
mmaf01055
Biosynthesis of vancomycin group antibiotics
mmaf01100
Metabolic pathways
mmaf01110
Biosynthesis of secondary metabolites
mmaf01250
Biosynthesis of nucleotide sugars
Module
mmaf_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
mmaf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GCM100_08630 (rfbB-1)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GCM100_08630 (rfbB-1)
01055 Biosynthesis of vancomycin group antibiotics
GCM100_08630 (rfbB-1)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GCM100_08630 (rfbB-1)
00525 Acarbose and validamycin biosynthesis
GCM100_08630 (rfbB-1)
Enzymes [BR:
mmaf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
GCM100_08630 (rfbB-1)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
Motif
Other DBs
NCBI-ProteinID:
BDZ73144
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All DBs
Position
complement(852861..853880)
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AA seq
339 aa
AA seq
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MIRRLIEVSDYHIINIDKLTYAGNLESLLPVADNPRYHFEQADICDAEKMNALFKEYQPT
AIMHLAAESHVDRSIDGPADFVQTNLVGTYVLLEAARQYWKTLDKDAAAQFRFHHISTDE
VYGTLGETGLFEETTPYQPNSPYSATKAGSDHLVRAWHHTYGLPVVMTNCSNNYGPYQFP
EKLIPLIINNALVGKPLPVYGKGDNIRDWLYVDDHADALQLVLEQGKLGESYNIGGFNEH
TNLDVVHRVCDILDELLPESEHCPHRDLITFVTDRPGHDQRYAIDATKINRELGWTPKET
FTTGLRKTVEWYIDNREWNERVMDGSYQQERLGLGEQAS
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
ttgattcgtcgtcttatcgaagttagtgattaccacattatcaatattgataaactgacc
tacgcaggtaatctggagtcacttctacctgttgctgacaatccgcgttatcattttgaa
caagccgatatctgtgatgcggaaaagatgaatgctttgttcaaggagtatcagcctact
gcaatcatgcatctagcggcagaatcacatgtcgatcgctcgatagacggacccgctgat
tttgtgcaaaccaatttagtgggtacctacgttttattagaagcggccagacagtactgg
aaaacgcttgataaagacgctgcggcacaatttcgtttccatcatatctccaccgatgag
gtatacggcaccttaggtgaaacaggcttgtttgaagagacaacaccttatcaaccaaat
tcaccctattcagcgaccaaagcagggagtgatcacttggttcgtgcatggcatcacacc
tatggtctacccgttgtcatgaccaactgctctaataattacggtccctatcagtttcct
gaaaaattgattccactgattatcaataatgcattggtgggcaaacccttaccagtctat
ggcaaaggcgataatatccgtgattggttgtatgtggatgatcacgcggatgccttacag
cttgttttggaacaagggaagctgggcgaaagctataatattggcggctttaacgaacat
accaatcttgatgttgtgcatcgtgtttgtgacattctggatgagttattacccgaatct
gaacattgtcctcatcgagatttgattacttttgtcacggatcgccctggtcatgatcaa
cgttatgcgattgatgccactaaaatcaatcgtgaattaggttggacaccaaaagaaaca
tttactactggcctacgtaaaacagtggaatggtatatcgacaaccgtgagtggaatgag
cgtgtcatggatggtagttatcaacaagagcgcttagggttgggagaacaggcatcatga
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