Methylophaga marina: GCM100_09240
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Entry
GCM100_09240 CDS
T09183
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
mmaf
Methylophaga marina
Pathway
mmaf00470
D-Amino acid metabolism
mmaf00550
Peptidoglycan biosynthesis
mmaf01100
Metabolic pathways
mmaf01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
mmaf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GCM100_09240 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GCM100_09240 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
GCM100_09240 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mmaf01011
]
GCM100_09240 (ddlB)
Enzymes [BR:
mmaf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
GCM100_09240 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
mmaf01011
]
Precursor biosynthesis
Amino acid ligase
GCM100_09240 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_4
ATP-grasp_3
CPSase_L_D2
RimK
ATPgrasp_YheCD
Motif
Other DBs
NCBI-ProteinID:
BDZ73205
LinkDB
All DBs
Position
complement(913957..914895)
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AA seq
312 aa
AA seq
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MIKHTVSAAEFGRVAVLMGGRSAEREISLISGNAVLAGLQRSGIDAYGIDVSFDICQKMN
SGEFDRAFIVLHGRGGEDGEIQGFLQAINLPYTGSAISASVLSMNKRLSKLAWIQQGLPT
ALFVPVSAQTNTDELVADLGLPLIIKPVNEGSSIGMSKVNDHSDLQKAIDLALKYDTDVI
AEQWIHGEEYTVAILDGEALPAIRLKTPHEFYDFDAKYHANDTEYLCPCGLEADVEKGMQ
DIALKAFNALGMQGWGRIDFMRDKQGNLFLLEANSVPGMTDHSLVPMAAKQAGMSFDDLV
CRILETSFRGEG
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgataaaacacactgtgtctgctgctgaatttggtcgtgttgctgtactgatgggcggc
cgatctgctgaacgtgagatttcactcattagtggcaatgcggtattagctggcttacaa
cgtagtggtatcgatgcgtatggcatcgatgtcagcttcgatatctgtcaaaaaatgaac
agtggtgaatttgatcgtgcgtttatcgtcctccatggacgtggcggtgaagatggtgaa
attcaaggttttttacaggccatcaatctgccttacaccggaagtgcaattagtgcttct
gtactgtctatgaacaaacgattgagcaaattagcgtggattcaacagggtttaccaact
gccctgtttgttcctgtgtctgcacaaaccaataccgatgaattagttgctgatttaggg
ctacctctcatcattaagcctgttaacgaaggttccagcattggaatgtccaaggtcaat
gaccacagtgacttacaaaaggccattgatttggcattgaaatatgacaccgatgttatc
gctgagcagtggatacacggggaggaatataccgttgccattttagacggtgaagcttta
cctgccatccggttaaaaacgccacatgaattttatgattttgacgccaagtatcacgcc
aatgacactgaatatttatgtccctgcggtttggaagccgatgttgaaaaaggtatgcaa
gacatcgcgttaaaagcctttaatgccctaggcatgcaaggatgggggcgtatcgacttt
atgcgtgacaagcaaggcaatctgtttttacttgaagcaaacagtgttcccggtatgacc
gatcacagtctagtccccatggctgcgaagcaagctggaatgtcattcgatgatttagtc
tgccgcattttagaaacaagcttcagaggtgagggctga
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