Methylophaga marina: GCM100_09350
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Entry
GCM100_09350 CDS
T09183
Symbol
pbpB
Name
(GenBank) penicillin-binding protein
KO
K03587
cell division protein FtsI (penicillin-binding protein 3) [EC:
3.4.16.4
]
Organism
mmaf
Methylophaga marina
Pathway
mmaf00550
Peptidoglycan biosynthesis
mmaf01100
Metabolic pathways
mmaf01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
mmaf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GCM100_09350 (pbpB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GCM100_09350 (pbpB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mmaf01011
]
GCM100_09350 (pbpB)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmaf03036
]
GCM100_09350 (pbpB)
Enzymes [BR:
mmaf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
GCM100_09350 (pbpB)
Peptidoglycan biosynthesis and degradation proteins [BR:
mmaf01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
GCM100_09350 (pbpB)
Chromosome and associated proteins [BR:
mmaf03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
GCM100_09350 (pbpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
wHTH-PRTase_assc
Motif
Other DBs
NCBI-ProteinID:
BDZ73216
LinkDB
All DBs
Position
complement(924730..926433)
Genome browser
AA seq
567 aa
AA seq
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MKQRGQKVQQVGAWRLNLVRIMFVLMVAGLCWRLADIQVLNPEFLRHQGDARHLRQVPIV
AHRGMIVDRHGEPLAISTPVHSVWLNPQDVLASDPRIPQLAQLLGLSVQKIKNKIEENQS
REFVYLKRRITPELSAKVKALGIQGVALQREYKRYYPAGEVASHIVGFTNIDDIGQEGLE
LTYDAVLTGRPGLKRMVRDSRGNYVEGGELIRPAKSGENVQLSIDLRLQYLTYQALKKTV
AEHQAKSGTAVILDTRTGEVLAMANQPSYNPNNRAGLKPSDLRNRAVTDLFEPGSTVKPF
TVVSGIKSGEFDQSTIINTHPGYYRVSGHPIKDFRDYGEIDLTTLIQKSSNVGASKIALA
LDPAELWHDFASFGLGEATGAYFPGEAMGTMPDPQSWRTLDIATMGYGYGLSTSAMQLAR
AYTVLADGGILKPVTFIKTDKVPKGRREFSADIMRDVVQMMVKVIEPGGTATRAAVANYH
VAGKTGTAKKAISGGYADDRYQSVFAGIIPASAPRLAMVVMIDEPQGEYYGGAVAAPVFA
EVMAGAMRLLNIAPDDLPMTQMQVAHK
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagcgcggtcagaaagtgcaacaagttggcgcttggcgcctcaacctggttcgc
atcatgttcgtattgatggtggctggattatgctggcgtttggctgatatccaggtctta
aatcctgagtttttgcgtcatcaaggtgatgcccgccatcttcgtcaagtgcctatcgtt
gctcatcgcggcatgattgtggatcgccatggtgaaccattggcaataagtacacctgta
cattctgtctggttaaatcctcaggatgtattagcgagtgatccccgcataccacaactg
gcacagttactgggtttatccgtccaaaaaattaaaaataagattgaagagaatcagtcc
cgagaatttgtgtatctgaaacgtcgtatcacaccggaattatcagcaaaagtaaaagcg
ctgggcatacagggtgtggcgcttcaacgtgaatacaaacgttattatccagctggtgaa
gttgcttcacatattgtgggttttaccaatattgatgatatcggtcaggaaggacttgag
ctgacttacgatgcagtgctgactggtcgccctggattgaagcgtatggtgcgtgacagc
cgtggtaactacgttgaaggtggtgagctgattcgtccggctaaatccggcgaaaatgtg
cagttgagcattgatctcagactgcaatatttaacttaccaagccttgaagaaaaccgtt
gctgaacatcaggcaaaatcaggtactgctgtcattcttgatacgcgtacgggtgaagtg
ctggcgatggctaatcagccctcatataacccaaacaatagagccggcctcaaaccaagt
gatctcagaaaccgcgctgttactgatttgtttgaaccgggctcaacggtcaagccattt
acggtcgtcagtggtattaaatcgggtgagtttgatcaaagcaccatcattaatacacac
cctggctattatcgagtaagtggccaccccataaaagatttcagagactatggtgaaatc
gacttgacgacccttatccagaaatcaagtaatgtcggtgccagtaagattgcgttggct
cttgatcctgctgaactgtggcatgactttgccagtttcggcttgggcgaggcaacgggt
gcttattttccaggtgaggcgatgggaaccatgccggatcctcagtcatggcgcacattg
gatatcgccaccatgggatatggttacggtttatcgaccagtgcgatgcaacttgccaga
gcctacaccgttttagctgatggtggcattctcaaacctgtcaccttcattaaaacagat
aaagtgccaaaaggacgacgagaattctcagcagacatcatgcgtgatgtcgtgcagatg
atggtgaaggtcattgaaccaggcggaaccgccacacgtgctgctgtggcgaattatcat
gtagctggaaaaaccggaaccgcgaaaaaagcgatcagcggtggttatgctgatgatcgt
tatcaatctgtctttgctggcatcatccccgcatcagctccacgtttagctatggtcgtg
atgattgatgagccacaaggtgaatattacggtggcgcagttgctgcgcctgtgtttgca
gaagtgatggcgggtgcaatgcgcttgttgaatattgcccctgacgatttaccgatgacc
cagatgcaggtggctcacaaatga
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