Methylophaga marina: GCM100_09580
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Entry
GCM100_09580 CDS
T09183
Name
(GenBank) hypothetical protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mmaf
Methylophaga marina
Brite
KEGG Orthology (KO) [BR:
mmaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmaf03016
]
GCM100_09580
Enzymes [BR:
mmaf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
GCM100_09580
Transfer RNA biogenesis [BR:
mmaf03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
GCM100_09580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
BDZ73239
LinkDB
All DBs
Position
943047..943838
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AA seq
263 aa
AA seq
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MTIQFVNTQAGLETLCQQLADSDWLAVDTEFHREKTYFPQLCLIQVANHDVIACVDPLAI
EDLSPLMALFYSDDMTIVFHAARQDLELFFLMQNALPPKVFDTQLAATVLGYGDQIGYGN
LVKQCLGIELDKGQARTDWRQRPLSDAQVEYAADDVRYLRQVYLQLLDELNRTGRVEWLS
DDFAALTAIETYQEDPQQSWLRVKGAGRLKSQQLVILQELGAWREKRAIELDLPRRWILK
DDVMLDLARFAPMTLEAMKKFVA
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgacaattcagtttgtaaatacacaagccggtcttgaaacactctgccaacagctagcc
gacagtgactggcttgccgttgataccgaattccatcgcgaaaagacctactttccacaa
ctatgcttaatccaagtggcgaaccatgatgttatcgcctgtgtggatccactagcaatt
gaagacctctcaccgttaatggcattattttactctgatgacatgaccattgtttttcat
gcggcaagacaggatttagaattatttttcttgatgcagaatgcacttccaccaaaagtg
tttgatacacaactcgcggcaacggttctcggctatggtgatcaaattggttatggcaat
ttggttaaacaatgtctaggcattgaacttgataaaggtcaagccagaacagactggcga
caacggcctctttctgatgcccaagtcgagtatgccgctgatgatgttcgctatcttcga
caagtttatttacaactccttgatgaacttaacagaacaggtcgtgtggagtggttaagt
gatgactttgcggcattaactgcaatagaaacctatcaggaagatccacaacaaagctgg
ctaagggtgaaaggtgctggcagattaaaaagtcagcaacttgtcatactgcaagaactt
ggcgcttggcgtgagaaacgggccattgagcttgatttacctcgtcgctggattttgaaa
gatgatgtgatgctcgacttagctcgcttcgcgccaatgacgctcgaggcaatgaaaaaa
ttcgtggcctag
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